RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PSMD9O00233 223 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 UBXN7O94888 489 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 LAMP2P13473 410 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CCNB1P14635 433 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 IL12BP29460 328 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 DEFB128Q7Z7B8 93 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 MAFIPQ8WZ33 124 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 GDF3Q9NR23 364 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ERAL1O75616 437 aaKnown RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CA9Q16790 459 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ADAM32Q8TC27 787 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 COPS4Q9BT78 406 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ABCG4Q9H172 646 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 GIN1Q9NXP7 522 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 OR12D3Q9UGF7 316 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CRB1P82279 1406 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 RP1P56715 2156 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FAM86B2P0C5J1 330 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 TMEM44Q2T9K0 475 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 KLHL26Q53HC5 615 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SLC30A6Q6NXT4 461 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 PAMR1Q6UXH9 720 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 USP43Q70EL4 1123 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SVOPLQ8N434 492 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 OR10H4Q8NGA5 316 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF510Q9Y2H8 683 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 A0A1B0GVC2 190 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 B8ZZF3 427 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SCGB2A1O75556 95 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 AMPD1P23109 780 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ARSJQ5FYB0 599 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SLC27A1Q6PCB7 646 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 HSDL2Q6YN16 418 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 AGBL3Q8NEM8 1001 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 OR2AJ1Q8NGZ0 328 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ASB7Q9H672 318 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 PQBP1O60828 265 aaKnown RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PET100P0DJ07 73 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 AZGP1P25311 298 aaKnown RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TTI2Q6NXR4 508 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 SLC30A8Q8IWU4 369 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 FAM47BQ8NA70 645 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 AGAP11Q8TF27 550 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 DPF3Q92784 378 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TSPAN18Q96SJ8 248 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 OSMRQ99650 979 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TRMOQ9BU70 441 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PDP1Q9P0J1 537 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 RCOR3Q9P2K3 495 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ADGRE2Q9UHX3 823 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PRAMEF1O95521 474 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ASGR1P07306 291 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ELFN1P0C7U0 828 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PCSK2P16519 638 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 OR3A3P47888 321 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 OR3A2P47893 321 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 DEFA5Q01523 94 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 KIAA1324Q6UXG2 1013 aaKnown RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PTF1AQ7RTS3 328 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TXNRD3Q86VQ6 643 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 UNC5BQ8IZJ1 945 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 OR2L2Q8NH16 312 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 C1orf216Q8TAB5 229 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 POC1BQ8TC44 478 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TKTL2Q9H0I9 626 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 FADS3Q9Y5Q0 445 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PDYNP01213 254 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 VLDLRP98155 873 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PCDH1Q08174 1060 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 SEZ6Q53EL9 994 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF311Q5JNZ3 666 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 CCNYL2Q5T2Q4 361 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 WNT8BQ93098 351 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF285Q96NJ3 590 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TCF25Q9BQ70 676 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 C11orf16Q9NQ32 467 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 SMPD3Q9NY59 655 aaPredicted RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 MSRAQ9UJ68 235 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 C14orf166Q9Y224 244 aaKnown RBP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 MYH13Q9UKX3 1938 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 CLPXO76031 633 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 IFNA21P01568 189 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TFEBP19484 476 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 CD247P20963 164 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 DDX6P26196 483 aaKnown RBP eCLIP8.69□□□□□ -1.02
NIPBL-201ENST00000282516 MIPP30301 263 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 SEPHS1P49903 392 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 CASP9P55211 416 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 GRB10Q13322 594 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PDK4Q16654 411 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 OR10G6Q8NH81 332 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 DCAKDQ8WVC6 231 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TUBGCP5Q96RT8 1024 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF700Q9H0M5 742 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 PCDHGB2Q9Y5G2 931 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 ATG13O75143 517 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 AKAP3O75969 853 aa8.69□□□□□ -1.02
NIPBL-201ENST00000282516 TGFB3P10600 412 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms