RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 COMMD10Q9Y6G5 202 aa24.93■■□□□ 1.58
ROM1-201ENST00000278833 INSIG1O15503 277 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 RHOBTB1O94844 696 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 TFAP2AP05549 437 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 CDH13P55290 713 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 CLCQ05315 142 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 RALGDSQ12967 914 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 IKBKEQ14164 716 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 C11orf91Q3C1V1 193 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 ANKS6Q68DC2 871 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 BORAQ6PGQ7 559 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 RNF19BQ6ZMZ0 732 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 DHFR2Q86XF0 187 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 FBXO39Q8N4B4 442 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 SEPT5Q99719 369 aaPredicted RBP24.92■■□□□ 1.58
ROM1-201ENST00000278833 TUBB1Q9H4B7 451 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 SLC52A3Q9NQ40 469 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 MAP10Q9P2G4 905 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 SPO11Q9Y5K1 396 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 ILVBLA1L0T0 632 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 CLDN11O75508 207 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 SOAT2O75908 522 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 PYGLP06737 847 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 BMP2P12643 396 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 RGS19P49795 217 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 PTPRCAPQ14761 206 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 PFKFB4Q16877 469 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 TRIM60Q495X7 471 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 LCN8Q6JVE9 175 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 FUT10Q6P4F1 479 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 HERC6Q8IVU3 1022 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 PACRGLQ8N7B6 248 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 EME1Q96AY2 570 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 PLD4Q96BZ4 506 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 CASD1Q96PB1 797 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 TMEM175Q9BSA9 504 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 POLG2Q9UHN1 485 aa24.92■■□□□ 1.58
ROM1-201ENST00000278833 CNOT6Q9ULM6 557 aaKnown RBP24.92■■□□□ 1.58
ROM1-201ENST00000278833 FXYD1O00168 92 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 SIX3O95343 332 aaPredicted RBP24.91■■□□□ 1.58
ROM1-201ENST00000278833 CLPTM1O96005 669 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 GFAPP14136 432 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 SLC11A2P49281 568 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 OXCT1P55809 520 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 LSAMPQ13449 338 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 KIF19Q2TAC6 998 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 ANKS3Q6ZW76 656 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 CCT7Q99832 543 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 GID8Q9NWU2 228 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 RNF112Q9ULX5 631 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 LZTS1Q9Y250 596 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 SLC27A5Q9Y2P5 690 aa24.91■■□□□ 1.58
ROM1-201ENST00000278833 A0A0D9SEW6 157 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 ATP6AP2A0A1C7CYW4 349 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 H7C0S8 307 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 ATP6AP2O75787 350 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 PRLP01236 227 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 TSPAN8P19075 237 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 KCNQ1P51787 676 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 CLCN4P51793 760 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 ADARP55265 1226 aaKnown RBP24.9■■□□□ 1.58
ROM1-201ENST00000278833 XKR7Q5GH72 579 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 RSPO2Q6UXX9 243 aaPredicted RBP24.9■■□□□ 1.58
ROM1-201ENST00000278833 ERMP1Q7Z2K6 904 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 GLT6D1Q7Z4J2 308 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 CARM1Q86X55 608 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 DGCR14Q96DF8 476 aaKnown RBP24.9■■□□□ 1.58
ROM1-201ENST00000278833 CCDC68Q9H2F9 335 aa24.9■■□□□ 1.58
ROM1-201ENST00000278833 CCM2LQ9NUG4 571 aaPredicted RBP24.9■■□□□ 1.58
ROM1-201ENST00000278833 C2orf81A6NN90 581 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 NME4O00746 187 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 PFDN6O15212 129 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 PQBP1O60828 265 aaKnown RBP24.89■■□□□ 1.58
ROM1-201ENST00000278833 ECI2O75521 394 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 ATF6P18850 670 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 CAPN3P20807 821 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 EEF1DP29692 281 aaKnown RBP24.89■■□□□ 1.58
ROM1-201ENST00000278833 ATP5C1P36542 298 aaKnown RBP24.89■■□□□ 1.58
ROM1-201ENST00000278833 FOXA1P55317 472 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 MAP7D1Q3KQU3 841 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 BLOC1S3Q6QNY0 202 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 PAQR3Q6TCH7 311 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 SATL1Q86VE3 508 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 OR7D4Q8NG98 312 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 LRTOMTQ8WZ04 291 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 EXT2Q93063 718 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 TRIM54Q9BYV2 358 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 RBM38Q9H0Z9 239 aaKnown RBP24.89■■□□□ 1.58
ROM1-201ENST00000278833 PFDN4Q9NQP4 134 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 C8orf4Q9NR00 106 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 ATP11BQ9Y2G3 1177 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 GPR45Q9Y5Y3 372 aa24.89■■□□□ 1.58
ROM1-201ENST00000278833 TNRC18O15417 2968 aaPredicted RBP24.89■■□□□ 1.58
ROM1-201ENST00000278833 DYTNA2CJ06 578 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 GRXCR2A6NFK2 248 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 SUPT3HB4E1H0 165 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 SUPT3HO75486 399 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 MLYCDO95822 493 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 F11P03951 625 aa24.89■■□□□ 1.57
ROM1-201ENST00000278833 PSMC3P17980 439 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms