RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RIBC2Q9H4K1 309 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 AGO3Q9H9G7 860 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 UNKLQ9H9P5 680 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 FSCN3Q9NQT6 498 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 WSB2Q9NYS7 404 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 CDH22Q9UJ99 828 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 AGO2Q9UKV8 859 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 ASTN2O75129 1339 aaPredicted RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 DDX60Q8IY21 1712 aaKnown RBP4.63□□□□□ -1.67
CD44-202ENST00000278385 ADAMTSL1Q8N6G6 1762 aa4.63□□□□□ -1.67
CD44-202ENST00000278385 CCDC88AQ3V6T2 1871 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 OOEPA6NGQ2 149 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 B5MCH6 92 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 KIF28PB7ZC32 967 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TEX22C9J3V5 150 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 EBAG9O00559 213 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 RASGRF2O14827 1237 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 IFIT3O14879 490 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 SYN3O14994 580 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 CETN3O15182 167 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ADAMDEC1O15204 470 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ZNF185O15231 689 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TEX33O43247 280 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GMFGO60234 142 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GPRIN2O60269 458 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ZNF254O75437 659 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TADA2AO75478 443 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ITGA10O75578 1167 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 DNAJB5O75953 348 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 AKR7A3O95154 331 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 YEATS4O95619 227 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 FGFR1OPO95684 399 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 PTBP3O95758 552 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 PENKP01210 267 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 ITGB1P05556 798 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 URODP06132 367 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 S100A9P06702 114 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 MMP2P08253 660 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 CYC1P08574 325 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 C1SP09871 688 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ARP10275 920 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 UROSP10746 265 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 HSPA8P11142 646 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 COX7A2P14406 83 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 DDCP20711 480 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GALP22466 123 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TCEA1P23193 301 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 GLRA2P23416 452 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 DNAJB1P25685 340 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TAGLN2P37802 199 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 GYG1P46976 350 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 RFX5P48382 616 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 CCR3P51677 355 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 PMS2P54278 862 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 MFAP4P55083 255 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 HADHBP55084 474 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 SNU13P55769 128 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 UCP3P55916 312 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 HAND2P61296 217 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 NOMO3P69849 1222 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 MXRA7P84157 204 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GOLGA8DPQ0D2H9 430 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 SF3A3Q12874 501 aaKnown RBP eCLIP4.62□□□□□ -1.67
CD44-202ENST00000278385 DUSP8Q13202 625 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 IL11RAQ14626 422 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 AARDQ4LEZ3 155 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 MFSD14BQ5SR56 506 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 SPATA46Q5T0L3 261 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GKAP1Q5VSY0 366 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 AP1ARQ63HQ0 302 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 EFCAB12Q6NXP0 572 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 NEK5Q6P3R8 708 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 DLK2Q6UY11 383 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 B3GNT6Q6ZMB0 384 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ARMCX2Q7L311 632 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ARHGAP12Q8IWW6 846 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ZCCHC7Q8N3Z6 543 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 FSTL5Q8N475 847 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 CERS5Q8N5B7 392 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 AADATQ8N5Z0 425 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 BANPQ8N9N5 519 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 ST7LQ8TDW4 575 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GANCQ8TET4 914 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 C8orf76Q96K31 380 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 PRMT6Q96LA8 375 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 RMDN2Q96LZ7 410 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 GDAP1L1Q96MZ0 367 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 PLEKHG4BQ96PX9 1271 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 BCL7BQ9BQE9 202 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 IMPG2Q9BZV3 1241 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 MS4A7Q9GZW8 240 aaPredicted RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 DEFB129Q9H1M3 183 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 SYTL2Q9HCH5 934 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 SLAMF7Q9NQ25 335 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 XPNPEP3Q9NQH7 507 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 IARS2Q9NSE4 1012 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 LIN7CQ9NUP9 197 aaKnown RBP4.62□□□□□ -1.67
CD44-202ENST00000278385 TMEM140Q9NV12 185 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 TMEM184CQ9NVA4 438 aa4.62□□□□□ -1.67
CD44-202ENST00000278385 MOCS1Q9NZB8 636 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms