RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 HERVK_113P63132 956 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ECT2LQ008S8 904 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 PDCD2Q16342 344 aaPredicted RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 PDE12Q6L8Q7 609 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 C22orf39Q6P5X5 142 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 RAB44Q7Z6P3 723 aaPredicted RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CUZD1Q86UP6 607 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ARHGAP24Q8N264 748 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CBARPQ8N350 705 aaPredicted RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CPSF7Q8N684 471 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 PCDH20Q8N6Y1 951 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 POU5F2Q8N7G0 328 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF707Q96C28 371 aaPredicted RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ECHDC3Q96DC8 303 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 OTUB2Q96DC9 234 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 SCRN2Q96FV2 425 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 MAELQ96JY0 434 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 PPP1R36Q96LQ0 422 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 LYSMD1Q96S90 227 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ERVK-6Q9BXR3 956 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CEP44Q9C0F1 390 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 CD248Q9HCU0 757 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TNFRSF12AQ9NP84 129 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 IL26Q9NPH9 171 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 ZDHHC7Q9NXF8 308 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TRMT6Q9UJA5 497 aaKnown RBP9.53□□□□□ -0.88
TRIM55-201ENST00000276573 APPL1Q9UKG1 709 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 IKZF3Q9UKT9 509 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 TRAF6Q9Y4K3 522 aa9.53□□□□□ -0.88
TRIM55-201ENST00000276573 NOTCH4Q99466 2003 aa9.52□□□□□ -0.88
TRIM55-201ENST00000276573 LOC100653049A0A140TA62 436 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CAPN8A6NHC0 703 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GRXCR1A8MXD5 290 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CDC7O00311 574 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SDHDO14521 159 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UBFD1O14562 309 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PRMT5O14744 637 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 KERAO60938 352 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 KRT34O76011 436 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 POU2F2P09086 479 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 HSPA1AP0DMV8 641 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 HSPA1BP0DMV9 641 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 COX4I1P13073 169 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 BPIP17213 487 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CA5AP35218 305 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PPARGP37231 505 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 RAP1GDS1P52306 607 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PTPN5P54829 565 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 IL2P60568 153 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 MXRA7P84157 204 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CBX2Q14781 532 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PFKFB4Q16877 469 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 DNAL1Q4LDG9 190 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UGT3A1Q6NUS8 523 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CRTC1Q6UUV9 634 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 FAM151BQ6UXP7 276 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 DPY19L3Q6ZPD9 716 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TPRG1Q6ZUI0 275 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ADIPOR2Q86V24 386 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SERPINA9Q86WD7 417 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 KIRREL3Q8IZU9 778 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 AFAP1L2Q8N4X5 818 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PTGR2Q8N8N7 351 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SIDT2Q8NBJ9 832 aaKnown RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GRIN3AQ8TCU5 1115 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CD200R1Q8TD46 325 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 EEF1AKMT1Q8WVE0 214 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 KCNJ9Q92806 393 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 EXT2Q93063 718 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ZNF641Q96N77 438 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SLC2A11Q9BYW1 496 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ZNF385DQ9H6B1 395 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ASB8Q9H765 288 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 MARK1Q9P0L2 795 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 DPP7Q9UHL4 492 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 RNF112Q9ULX5 631 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 DHRS7Q9Y394 339 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 PCDHB1Q9Y5F3 818 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 WNT6Q9Y6F9 365 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TRBV5-4A0A0C4DH59 114 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CCDC189A1A4V9 331 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 A8MX80 341 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 SLC9A3R1O14745 358 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GPR39O43194 453 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 BNIP3LO60238 219 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TM7SF2O76062 418 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TSPAN12O95859 305 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ZNF7P17097 686 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CEBPBP17676 345 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 GM2AP17900 193 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 TSPAN8P19075 237 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UGT1A6P19224 532 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UGT1A1P22309 533 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UGT1A4P22310 534 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 ADSLP30566 484 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UGT1A3P35503 534 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 UGT1A5P35504 534 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CLCN7P51798 805 aa9.52□□□□□ -0.89
TRIM55-201ENST00000276573 CCNHP51946 323 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms