RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 FAM47BQ8NA70 645 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ULBP1Q9BZM6 244 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 NPEPPSL1A6NEC2 478 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PLIN3O60664 434 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 C9P02748 559 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF697Q5TEC3 545 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 DIRAS2Q96HU8 199 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 C12orf66Q96MD2 445 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SP140LQ9H930 580 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MAFFQ9ULX9 164 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 TLL2Q9Y6L7 1015 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 NOS1APO75052 506 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CALCAP01258 141 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ITIH1P19827 911 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SOX10P56693 466 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CACNG1Q06432 222 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PTP4A2Q12974 167 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 VPS26BQ4G0F5 336 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CLNKQ7Z7G1 428 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 AIF1LQ9BQI0 150 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 FAM240BA0A1B0GVZ2 78 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 MATN2O00339 956 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 FSCN2O14926 492 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SPTLC1O15269 473 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 RPP40O75818 363 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 EPHA3P29320 983 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 KIR3DL1P43629 444 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 GJA8P48165 433 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 TAPT1Q6NXT6 567 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ZCCHC12Q6PEW1 402 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ERMAPQ96PL5 475 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SEMA3CQ99985 751 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 EIF2B3Q9NR50 452 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 GIN1Q9NXP7 522 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 TAS2R14Q9NYV8 317 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CALML5Q9NZT1 146 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 HMGXB4Q9UGU5 601 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 NDUFS2O75306 463 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ASLP04424 464 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PDHA2P29803 388 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 HNF4AP41235 474 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PPATQ06203 517 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 LARS2Q15031 903 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CELF3Q5SZQ8 465 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 ATXN7L2Q5T6C5 722 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 WSCD1Q658N2 575 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 C17orf64Q86WR6 236 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 CCDC107Q8WV48 283 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 TSEN15Q8WW01 171 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 IPCEF1Q8WWN9 437 aaPredicted RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 PCBD2Q9H0N5 130 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 TRNAU1APQ9NX07 287 aaKnown RBP7.95□□□□□ -1.14
LIMD1-201ENST00000273317 SOHLH2Q9NX45 425 aa7.95□□□□□ -1.14
LIMD1-201ENST00000273317 IPO13O94829 963 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PTPN5P54829 565 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 LY6KQ17RY6 165 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 P2RY8Q86VZ1 359 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 HPS6Q86YV9 775 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 OR10H5Q8NGA6 315 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 DNAJB8Q8NHS0 232 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 STOX2Q9P2F5 926 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 IFNW1P05000 195 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ADRB2P07550 413 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 GNPDA1P46926 289 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 C16orf59Q7L2K0 433 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 RD3Q7Z3Z2 195 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 KCTD5Q9NXV2 234 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 XPR1Q9UBH6 696 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ZMPSTE24O75844 475 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 CCNYL2Q5T2Q4 361 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ACO2Q99798 780 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 DNAJC11Q9NVH1 559 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PEX11AO75192 247 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 NTRK1P04629 796 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 UBA1P22314 1058 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 HERC3Q15034 1050 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 NPNTQ6UXI9 565 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 RTL4Q6ZR62 310 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SAMD7Q7Z3H4 446 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ADGRA1Q86SQ6 560 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PMM1Q92871 262 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 COL26A1Q96A83 441 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 NUSAP1Q9BXS6 441 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 GBA3Q9H227 469 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ZNF304Q9HCX3 659 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 A0A0J9YYE9 177 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 CAPN15O75808 1086 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 RSL1D1O76021 490 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 MANFP55145 182 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 BTG3Q14201 252 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 SNIP1Q8TAD8 396 aaKnown RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 LNX1Q8TBB1 728 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-201ENST00000273317 KCTD4Q8WVF5 259 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 TMEM109Q9BVC6 243 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ZNHIT2Q9UHR6 403 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ADORA2AP29274 412 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 PAMR1Q6UXH9 720 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 ZZZ3Q8IYH5 903 aa7.94□□□□□ -1.14
LIMD1-201ENST00000273317 LRRC52Q8N7C0 313 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms