RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CYP2A6P11509 494 aaPredicted RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 CDK11BP21127 795 aaKnown RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 CD82P27701 267 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 HSPA9P38646 679 aaKnown RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 PBX1P40424 430 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 GPR3P46089 330 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 FASLGP48023 281 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 CSRP3P50461 194 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 ZNF135P52742 658 aaPredicted RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 GALNT2Q10471 571 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 SLC10A2Q12908 348 aaPredicted RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 DPYSL3Q14195 570 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 IQCB1Q15051 598 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 ARMC12Q5T9G4 340 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 ANKS6Q68DC2 871 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 MARK2Q7KZI7 788 aaKnown RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 TIPARPQ7Z3E1 657 aaKnown RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 SFRP1Q8N474 314 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 ATPAF2Q8N5M1 289 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 NIPA2Q8N8Q9 360 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 TEKT4Q8WW24 435 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 ART4Q93070 314 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 OR2M4Q96R27 311 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 TAAR9Q96RI9 348 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 TDRD1Q9BXT4 1180 aaKnown RBP8.89□□□□□ -0.99
TPM3-201ENST00000271850 BRD8Q9H0E9 1235 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 APMAPQ9HDC9 416 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 GOLGA6AQ9NYA3 693 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 DTLQ9NZJ0 730 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 TBC1D29Q9UFV1 150 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 CHKBQ9Y259 395 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 SCINQ9Y6U3 715 aa8.89□□□□□ -0.99
TPM3-201ENST00000271850 LOC101059948A0A1B0GTJ6 334 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 A0A1W2PQ67 120 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 EFCAB7A8K855 629 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 PDE2AO00408 941 aaPredicted RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 INPP4BO15327 924 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 CLDN7O95471 211 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 ATP1A1P05023 1023 aaKnown RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 CYP1A2P05177 515 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 CCDC172P0C7W6 258 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 GARSP41250 739 aaKnown RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 GPR1P46091 355 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 CDH6P55285 790 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 TAS2R40P59535 323 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 SRSF1Q07955 248 aaKnown RBP eCLIP8.88□□□□□ -0.992e-7■□□□□ 8.7
TPM3-201ENST00000271850 KLHL30Q0D2K2 578 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 TRA2AQ13595 282 aaKnown RBP eCLIP8.88□□□□□ -0.994e-13■■■■□ 25.8
TPM3-201ENST00000271850 NR1I3Q14994 352 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 PAFAH1B3Q15102 231 aaKnown RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 CLPPQ16740 277 aaPredicted RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 BOLA3Q53S33 107 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 RALGPS1Q5JS13 557 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 CCDC183Q5T5S1 534 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 ZNF648Q5T619 568 aaPredicted RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 HENMT1Q5T8I9 393 aaKnown RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 MARC1Q5VT66 337 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 PPP1R2P3Q6NXS1 205 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 TMEM71Q6P5X7 295 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 USP45Q70EL2 814 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 ZNF765Q7L2R6 523 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 ARHGAP22Q7Z5H3 698 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.88□□□□□ -0.99
TPM3-201ENST00000271850 PQLC3Q8N755 202 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 ANKRD20A12PQ8NF67 263 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 AP2M1Q96CW1 435 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 RTP4Q96DX8 246 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 RNF31Q96EP0 1072 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 LYSMD1Q96S90 227 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 CTRCQ99895 268 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 BPIFA3Q9BQP9 254 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 RIOK2Q9BVS4 552 aaKnown RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 DDA1Q9BW61 102 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 GEMIN8Q9NWZ8 242 aaKnown RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 KCNK4Q9NYG8 393 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 OGFRQ9NZT2 677 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 SEPT10Q9P0V9 454 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 SCHIP1Q9P0W5 487 aaPredicted RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 PILRAQ9UKJ1 303 aa8.88□□□□□ -0.99
TPM3-201ENST00000271850 USP9XQ93008 2570 aaPredicted RBP8.88□□□□□ -0.99
TPM3-201ENST00000271850 A0A087X0T9 212 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 PRR19A6NJB7 356 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 B4E171 279 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 NKX2-8O15522 239 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 RAD1O60671 282 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 DLGAP3O95886 979 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 FAM228BP0C875 321 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 MYBL1P10243 752 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 F8A1P23610 371 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 ARL4AP40617 200 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 TSPAN7P41732 249 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 POLE2P56282 527 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 GBE1Q04446 702 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 ZBTB17Q13105 803 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 QPCTQ16769 361 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 COLEC12Q5KU26 742 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 ATP1A1-AS1Q5TC04 95 aa8.87□□□□□ -0.99
TPM3-201ENST00000271850 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms