RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 AOC1P19801 751 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CTSOP43234 321 aaPredicted RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 KLC1Q07866 573 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 TRMT5Q32P41 509 aaKnown RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CARD16Q5EG05 197 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 LY6G5CQ5SRR4 150 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 LRRC74BQ6ZQY2 392 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 SCUBE1Q8IWY4 988 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 PIANPQ8IYJ0 282 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 NKAPQ8N5F7 415 aaKnown RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 RBM15BQ8NDT2 890 aaKnown RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF707Q96C28 371 aaPredicted RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 LYSMD1Q96S90 227 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ALG9Q9H6U8 611 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 LRCH1Q9Y2L9 728 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 C1orf232A0A0U1RR37 186 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CCDC189A1A4V9 331 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CAPN8A6NHC0 703 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 SMIM24O75264 130 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ESR1P03372 595 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 PAX7P23759 505 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 WEE1P30291 646 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 GKP32189 559 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 HNF1BP35680 557 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 STK19P49842 368 aaPredicted RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CDKN1CP49918 316 aaPredicted RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ATP6V0D1P61421 351 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ERVK-21P61565 698 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 NFKB2Q00653 900 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 PTPRRQ15256 657 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 UGT3A1Q6NUS8 523 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 TAS2R42Q7RTR8 314 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 PLPP6Q8IY26 295 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 AHI1Q8N157 1196 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CELF5Q8N6W0 485 aaKnown RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 EID2BQ96D98 161 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ZSWIM3Q96MP5 696 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 FAM161BQ96MY7 647 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF641Q96N77 438 aaPredicted RBP15.23■□□□□ 0.03
SF3B4-201ENST00000271628 BIRC8Q96P09 236 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 TRMOQ9BU70 441 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 SUV39H2Q9H5I1 410 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 PLA2G4CQ9UP65 541 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 FAM50BQ9Y247 325 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 PPIL1Q9Y3C6 166 aa15.23■□□□□ 0.03
SF3B4-201ENST00000271628 CIB2O75838 187 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 IMPDH1P20839 514 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 MPSTP25325 297 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 NNMTP40261 264 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 PTPN5P54829 565 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 SESN3P58005 492 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 LYPLAL1Q5VWZ2 237 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
SF3B4-201ENST00000271628 KIAA0907Q7Z7F0 614 aaPredicted RBP15.22■□□□□ 0.03
SF3B4-201ENST00000271628 RBM23Q86U06 439 aaKnown RBP15.22■□□□□ 0.03
SF3B4-201ENST00000271628 LSMEM2Q8N112 164 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 CBARPQ8N350 705 aaPredicted RBP15.22■□□□□ 0.03
SF3B4-201ENST00000271628 AFAP1L2Q8N4X5 818 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 STAG3L4Q8TBR4 150 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 KCNJ9Q92806 393 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 ECHDC3Q96DC8 303 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 SCRN2Q96FV2 425 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 DERL2Q9GZP9 239 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 ZDHHC2Q9UIJ5 367 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 ANGPTL2Q9UKU9 493 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 FNDC3AQ9Y2H6 1198 aaKnown RBP15.22■□□□□ 0.03
SF3B4-201ENST00000271628 PCDHB1Q9Y5F3 818 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 OAS3Q9Y6K5 1087 aaKnown RBP15.22■□□□□ 0.03
SF3B4-201ENST00000271628 CHD9Q3L8U1 2897 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 MYOFQ9NZM1 2061 aa15.22■□□□□ 0.03
SF3B4-201ENST00000271628 NEMP2A6NFY4 417 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 GRXCR1A8MXD5 290 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 ZBTB14O43829 449 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 CEBPBP17676 345 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 POLR2EP19388 210 aaKnown RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 CPA2P48052 419 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 POLR2LP62875 67 aaKnown RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 KDSRQ06136 332 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 CBX2Q14781 532 aaPredicted RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 CDKN3Q16667 212 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 IRGCQ6NXR0 463 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 PAQR3Q6TCH7 311 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 TPRG1Q6ZUI0 275 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 SNX20Q7Z614 316 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 SMG7Q92540 1137 aaKnown RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 PHF21BQ96EK2 531 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 L3HYPDHQ96EM0 354 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 MED16Q9Y2X0 877 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 GBF1Q92538 1859 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 E5RI56 91 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 CLDN7O95471 211 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF7P17097 686 aaPredicted RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 CCNHP51946 323 aaPredicted RBP15.21■□□□□ 0.03
SF3B4-201ENST00000271628 VWA5B1Q5TIE3 1220 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 GRAMD4Q6IC98 578 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 ACAD11Q709F0 780 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 USP45Q70EL2 814 aa15.21■□□□□ 0.03
SF3B4-201ENST00000271628 RAB44Q7Z6P3 723 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms