RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 MMP2P08253 660 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 OCM2P0CE71 109 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 OCMP0CE72 109 aaPredicted RBP27.36■■□□□ 1.97
CBX4-201ENST00000269397 CYP2C18P33260 490 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 KCNK10P57789 538 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 EIF4EBP2Q13542 120 aaPredicted RBP27.36■■□□□ 1.97
CBX4-201ENST00000269397 MFSD10Q14728 455 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 TIGD2Q4W5G0 525 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 FAM117BQ6P1L5 589 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 BLOC1S5Q8TDH9 187 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 BIRC7Q96CA5 298 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 ATP13A1Q9HD20 1204 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 SELENONQ9NZV5 590 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 COQ6Q9Y2Z9 468 aa27.36■■□□□ 1.97
CBX4-201ENST00000269397 SUPT3HB4E1H0 165 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 K7EPI3 171 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 KCNH1O95259 989 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 MATN4O95460 622 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 THP07101 528 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 SLC2A3P11169 496 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 PCNAP12004 261 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 HOXC13P31276 330 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 SCNN1GP51170 649 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 NFATC3Q12968 1075 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 RALGPS2Q86X27 583 aaPredicted RBP27.35■■□□□ 1.97
CBX4-201ENST00000269397 NAT16Q8N8M0 369 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 CHID1Q9BWS9 393 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 A0A1W2PP18 115 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 GOT2P00505 430 aaKnown RBP27.35■■□□□ 1.97
CBX4-201ENST00000269397 FCGR1AP12314 374 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 IDO1P14902 403 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 ZNF37AP17032 561 aaPredicted RBP27.35■■□□□ 1.97
CBX4-201ENST00000269397 FDXRP22570 491 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 BRCC3P46736 316 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 CLCQ05315 142 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 ITIH5Q86UX2 942 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 NUDT8Q8WV74 236 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 ESAMQ96AP7 390 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 AGO3Q9H9G7 860 aaKnown RBP27.35■■□□□ 1.97
CBX4-201ENST00000269397 LTB4R2Q9NPC1 389 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 PFDN4Q9NQP4 134 aa27.35■■□□□ 1.97
CBX4-201ENST00000269397 RGS17Q9UGC6 210 aaPredicted RBP27.35■■□□□ 1.97
CBX4-201ENST00000269397 EVLQ9UI08 416 aaPredicted RBP27.35■■□□□ 1.97
CBX4-201ENST00000269397 MROH6A6NGR9 719 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 CBFA2T3O75081 653 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 FUCA1P04066 466 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 PCSK1P29120 753 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 MARC1Q5VT66 337 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 CENPSQ8N2Z9 138 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 SLC15A4Q8N697 577 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 ACOX2Q99424 681 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 TRIM54Q9BYV2 358 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 IKZF3Q9UKT9 509 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 FAM50BQ9Y247 325 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 LDB2O43679 373 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 TTKP33981 857 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 FSCN1Q16658 493 aaKnown RBP27.34■■□□□ 1.97
CBX4-201ENST00000269397 PLA2G4EQ3MJ16 856 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 CCNYL2Q5T2Q4 361 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 OR13C4Q8NGS5 318 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 PSMG2Q969U7 264 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 PPP1R2P1Q96PQ5 205 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 INTS10Q9NVR2 710 aaKnown RBP27.34■■□□□ 1.97
CBX4-201ENST00000269397 H0Y858 1186 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 NOL3O60936 208 aaKnown RBP27.34■■□□□ 1.97
CBX4-201ENST00000269397 CYBBP04839 570 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 HRH2P25021 359 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 SHMT2P34897 504 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 HLCSP50747 726 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 OR4D2P58180 307 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 ADARB1P78563 741 aaKnown RBP27.34■■□□□ 1.97
CBX4-201ENST00000269397 BRMS1LQ5PSV4 323 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 TBC1D21Q8IYX1 336 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 TSPAN18Q96SJ8 248 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 ATOH8Q96SQ7 321 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 TINF2Q9BSI4 451 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 TLR9Q9NR96 1032 aa27.34■■□□□ 1.97
CBX4-201ENST00000269397 KANSL1LA0AUZ9 987 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 C1RP00736 705 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 ALBP02768 609 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 NR4A1P22736 598 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 PLIN5Q00G26 463 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 AFMIDQ63HM1 303 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 USP51Q70EK9 711 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 NANOGQ9H9S0 305 aa27.33■■□□□ 1.97
CBX4-201ENST00000269397 FUOMA2VDF0 154 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 CNTN5O94779 1100 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 CCNA2P20248 432 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 ZFP36L2P47974 494 aaKnown RBP27.33■■□□□ 1.96
CBX4-201ENST00000269397 AGTR2P50052 363 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 RENBPP51606 427 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 LDLRAP1Q5SW96 308 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 ABHD16BQ9H3Z7 469 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 NMUR1Q9HB89 426 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 PLXNB2O15031 1838 aa27.33■■□□□ 1.96
CBX4-201ENST00000269397 C1orf232A0A0U1RR37 186 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 CCDC154A6NI56 674 aa27.32■■□□□ 1.96
CBX4-201ENST00000269397 CD3EAPO15446 510 aaKnown RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 RSL1D1O76021 490 aaKnown RBP27.32■■□□□ 1.96
CBX4-201ENST00000269397 GLP2RO95838 553 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms