RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 PGGT1BP53609 377 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 CAMK2GQ13555 558 aaPredicted RBP14.02□□□□□ -0.16
SS18-201ENST00000269137 TXNDC11Q6PKC3 985 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 CHPFQ8IZ52 775 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 TMEM151AQ8N4L1 468 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 ZNF513Q8N8E2 541 aaPredicted RBP14.02□□□□□ -0.16
SS18-201ENST00000269137 CCDC63Q8NA47 563 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 RDH11Q8TC12 318 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 KCTD4Q8WVF5 259 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 FAM107BQ9H098 131 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 P2RY12Q9H244 342 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 FGFR1OP2Q9NVK5 253 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 TAS2R13Q9NYV9 303 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 COPG2Q9UBF2 871 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 MID2Q9UJV3 735 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 RUVBL2Q9Y230 463 aaKnown RBP14.02□□□□□ -0.16
SS18-201ENST00000269137 MED16Q9Y2X0 877 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 PCDHB1Q9Y5F3 818 aa14.02□□□□□ -0.16
SS18-201ENST00000269137 COL4A2P08572 1712 aa14.02□□□□□ -0.17
SS18-201ENST00000269137 PRMT5O14744 637 aaPredicted RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 AREL1O15033 823 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 OR1I1O60431 355 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 IL1BP01584 269 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 ZNF7P17097 686 aaPredicted RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 RPS3P23396 243 aaKnown RBP eCLIP14.01□□□□□ -0.17
SS18-201ENST00000269137 ACRV1P26436 265 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 KPNA2P52292 529 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 ELP6Q0PNE2 266 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 DLG1Q12959 904 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 CCDC85BQ15834 202 aaPredicted RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 FAM83EQ2M2I3 478 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 POM121L1PQ3SYA9 428 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 AGAP9Q5VTM2 703 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 FAM46CQ5VWP2 391 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 HSD11B1LQ7Z5J1 315 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 PIGWQ7Z7B1 504 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 RBFAQ8N0V3 343 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 NXPE1Q8N323 547 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 NXNL1Q96CM4 212 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 CDX2Q99626 313 aaPredicted RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 HDAC8Q9BY41 377 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 IGSF5Q9NSI5 407 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 GPR39O43194 453 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 SPINT1O43278 529 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 RHOBTB1O94844 696 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 PYGLP06737 847 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 LTA4HP09960 611 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 CPA3P15088 417 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 GLULP15104 373 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 UGT1A6P19224 532 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 BGNP21810 368 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 UGT1A1P22309 533 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 UGT1A4P22310 534 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 UGT1A3P35503 534 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 UGT1A5P35504 534 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 METAP1P53582 386 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 IRX4P78413 519 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 ITGA9Q13797 1035 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 ITIH4Q14624 930 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 PCLAFQ15004 111 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 SKIV2LQ15477 1246 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 SMAD2Q15796 467 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 TMEM196Q5HYL7 178 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 CTSL3PQ5NE16 218 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 TMEM207Q6UWW9 146 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 LIPIQ6XZB0 460 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 RFLNAQ6ZTI6 216 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 ERN2Q76MJ5 926 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 TECPR1Q7Z6L1 1165 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 MMAAQ8IVH4 418 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 NRSN1Q8IZ57 195 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 HEXDCQ8WVB3 486 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 KCNJ9Q92806 393 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 ULK4Q96C45 1275 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 GRAMD1AQ96CP6 724 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 MECRQ9BV79 373 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 PITPNM3Q9BZ71 974 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 RSPH9Q9H1X1 276 aaPredicted RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 FAM83DQ9H4H8 585 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 ZDHHC4Q9NPG8 344 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 DYRK4Q9NR20 520 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 CRLS1Q9UJA2 301 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 OAS3Q9Y6K5 1087 aaKnown RBP14.01□□□□□ -0.17
SS18-201ENST00000269137 PIAS3Q9Y6X2 628 aa14.01□□□□□ -0.17
SS18-201ENST00000269137 TARM1B6A8C7 271 aa14□□□□□ -0.17
SS18-201ENST00000269137 G3V2L1 256 aa14□□□□□ -0.17
SS18-201ENST00000269137 EDF1O60869 148 aaKnown RBP14□□□□□ -0.17
SS18-201ENST00000269137 DNAJC6O75061 913 aa14□□□□□ -0.17
SS18-201ENST00000269137 CCDC166P0CW27 439 aa14□□□□□ -0.17
SS18-201ENST00000269137 NEFHP12036 1026 aa14□□□□□ -0.17
SS18-201ENST00000269137 ADRB3P13945 408 aa14□□□□□ -0.17
SS18-201ENST00000269137 DRD1P21728 446 aa14□□□□□ -0.17
SS18-201ENST00000269137 ALDH3A1P30838 453 aa14□□□□□ -0.17
SS18-201ENST00000269137 CA5AP35218 305 aa14□□□□□ -0.17
SS18-201ENST00000269137 SKIV2L2P42285 1042 aaKnown RBP14□□□□□ -0.17
SS18-201ENST00000269137 SETMARQ53H47 684 aaPredicted RBP14□□□□□ -0.17
SS18-201ENST00000269137 ATG16L1Q676U5 607 aa14□□□□□ -0.17
SS18-201ENST00000269137 LRRC8EQ6NSJ5 796 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms