RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MYO1HQ8N1T3 1032 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 FIBCD1Q8N539 461 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ATP6V0D2Q8N8Y2 350 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 HM13Q8TCT9 377 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ADAMTS16Q8TE57 1224 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 SLC45A3Q96JT2 553 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 TCF12Q99081 682 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 SEMA3CQ99985 751 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 EFHD1Q9BUP0 239 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 MID1IP1Q9NPA3 183 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 AGPAT4Q9NRZ5 378 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 PNPLA3Q9NST1 481 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
BEST3-201ENST00000266661 ABI2Q9NYB9 513 aaPredicted RBP12.4□□□□□ -0.42
BEST3-201ENST00000266661 POLG2Q9UHN1 485 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
BEST3-201ENST00000266661 ARHGAP10A1A4S6 786 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 ASPDHA6ND91 283 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 KERAO60938 352 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 RPS17P08708 135 aaKnown RBP12.39□□□□□ -0.43
BEST3-201ENST00000266661 LBPP18428 481 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 GRIA3P42263 894 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 FOXM1Q08050 763 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 BNIP2Q12982 314 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 GRIK2Q13002 908 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 BIRC2Q13490 618 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 LAMB3Q13751 1172 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 POLD3Q15054 466 aaPredicted RBP12.39□□□□□ -0.43
BEST3-201ENST00000266661 VPS26BQ4G0F5 336 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 RAP1GAP2Q684P5 730 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 NADSYN1Q6IA69 706 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 MRNIPQ6NTE8 343 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 ZBTB49Q6ZSB9 765 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 SPRED1Q7Z699 444 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 RTN4RL1Q86UN2 441 aaPredicted RBP12.39□□□□□ -0.43
BEST3-201ENST00000266661 DCP1BQ8IZD4 617 aaKnown RBP12.39□□□□□ -0.43
BEST3-201ENST00000266661 MIER2Q8N344 545 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 OR4L1Q8NH43 312 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.39□□□□□ -0.43
BEST3-201ENST00000266661 TMIGD2Q96BF3 282 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 GLT1D1Q96MS3 346 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 KCNA7Q96RP8 456 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 DERL2Q9GZP9 239 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 POLR1EQ9GZS1 481 aaKnown RBP12.39□□□□□ -0.43
BEST3-201ENST00000266661 ACTR3BQ9P1U1 418 aa12.39□□□□□ -0.43
BEST3-201ENST00000266661 TCRBV5S2A0A599 114 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 NR5A2O00482 541 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 ACOX3O15254 700 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 HNRNPRO43390 633 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 RAMP2O60895 175 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CLASP2O75122 1294 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 BMP10O95393 424 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 SLC4A1P02730 911 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 MAPKAPK2P49137 400 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 ZNF140P52738 457 aaPredicted RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 EFEMP1Q12805 493 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 FXNQ16595 210 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 XKR7Q5GH72 579 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 SLC39A5Q6ZMH5 540 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CIR1Q86X95 450 aaPredicted RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 TTC9BQ8N6N2 239 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 PAPD5Q8NDF8 572 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 TMEM125Q96AQ2 219 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 LRRC58Q96CX6 371 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CDKN2AIPNLQ96HQ2 116 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 ZNF599Q96NL3 588 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 TMEM79Q9BSE2 394 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 HAUS8Q9BT25 410 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CATSPERZQ9NTU4 200 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 TRMT13Q9NUP7 481 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 INTS10Q9NVR2 710 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 ZNF225Q9UK10 706 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 MYRFQ9Y2G1 1151 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 SQORQ9Y6N5 450 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 SCN5AQ14524 2016 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 LCHNA4D1U4 455 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 AKAP10O43572 662 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 PQBP1O60828 265 aaKnown RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 VPS4BO75351 444 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 TMCC1O94876 653 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 PRSS56P0CW18 603 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CDK4P11802 303 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CHRM3P20309 590 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 MYF6P23409 242 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 HOXD9P28356 352 aaPredicted RBP12.38□□□□□ -0.43
BEST3-201ENST00000266661 ETFBP38117 255 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 CLCQ05315 142 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 RING1Q06587 406 aa12.38□□□□□ -0.43
BEST3-201ENST00000266661 LCP2Q13094 533 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms