RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CCDC142Q17RM4 750 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 CYBRD1Q53TN4 286 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 CYP4V2Q6ZWL3 525 aaPredicted RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 PIM3Q86V86 326 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 CADM2Q8N3J6 435 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 OR10A6Q8NH74 314 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 CLHC1Q8NHS4 586 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 TRIM63Q969Q1 353 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 MROQ9BYG7 248 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 ACAD9Q9H845 621 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 RABL2BQ9UNT1 228 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 TIMM13Q9Y5L4 95 aaPredicted RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 COL4A1P02462 1669 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 UBXN8O00124 270 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 MEN1O00255 615 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 DNTTP04053 509 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 DGKQP52824 942 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 NOL9Q5SY16 702 aaKnown RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 TBPL2Q6SJ96 375 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 ARMCX2Q7L311 632 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 DET1Q7L5Y6 550 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 STON2Q8WXE9 905 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 KATNAL1Q9BW62 490 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 MOV10Q9HCE1 1003 aaKnown RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 INTS7Q9NVH2 962 aaKnown RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 CMTM6Q9NX76 183 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 IL37Q9NZH6 218 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 SLAMF8Q9P0V8 285 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 NUP214P35658 2090 aaPredicted RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 OR51F1A6NGY5 319 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 HNRNPCL2B2RXH8 293 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 IL18RAPO95256 599 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 PGK1P00558 417 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 GRM5P41594 1212 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 B3GNT9Q6UX72 402 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 SLC22A9Q8IVM8 553 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 EGFL8Q99944 293 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 SYNPO2Q9UMS6 1093 aa16.21■□□□□ 0.19
GPC1-201ENST00000264039 DNMT3AQ9Y6K1 912 aaPredicted RBP16.21■□□□□ 0.19
GPC1-201ENST00000264039 MARF1Q9Y4F3 1742 aaKnown RBP16.21■□□□□ 0.18
GPC1-201ENST00000264039 DDX60Q8IY21 1712 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 H0YJX3 145 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ZNF701M0R085 212 aaPredicted RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 GPR25O00155 361 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 MDM4O15151 490 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CSF2P04141 144 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ANXA6P08133 673 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 SLC2A4P14672 509 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CCR1P32246 355 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 NDUFV1P49821 464 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CD47Q08722 323 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 TP53BP2Q13625 1128 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ARMCX4Q5H9R4 360 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ANKRD34AQ69YU3 496 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ILDR2Q71H61 639 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 FAM151AQ8WW52 585 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 PHF21AQ96BD5 680 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 FEM1CQ96JP0 617 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 SMAD5Q99717 465 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 XYLT2Q9H1B5 865 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CPSF3Q9UKF6 684 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 PNMA8CA0A1B0GUJ8 204 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 SH3BP5O60239 455 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 PRKD3O94806 890 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 RUNX1T1Q06455 604 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CYP2U1Q7Z449 544 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 LSMEM2Q8N112 164 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 FBXO39Q8N4B4 442 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 STX19Q8N4C7 294 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CAMKK1Q8N5S9 505 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 OR13F1Q8NGS4 319 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 C3orf30Q96M34 536 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 NSUN5Q96P11 429 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 ZNF717Q9BY31 904 aaPredicted RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 RMND5AQ9H871 391 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ACTR8Q9H981 624 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 PCDH10Q9P2E7 1040 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ZW10O43264 779 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 SLC22A3O75751 556 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CHRNB1P11230 501 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 CYP3A5P20815 502 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 OR4D2P58180 307 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 UFM1P61960 85 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 PLA2G4EQ3MJ16 856 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 DACT2Q5SW24 774 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 INTS11Q5TA45 600 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 C15orf52Q6ZUT6 534 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 ADGRG5Q8IZF4 528 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 FRS2Q8WU20 508 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 TBL1YQ9BQ87 522 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 UGT2B28Q9BY64 529 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 AFF4Q9UHB7 1163 aaKnown RBP16.2■□□□□ 0.18
GPC1-201ENST00000264039 CPA4Q9UI42 421 aa16.2■□□□□ 0.18
GPC1-201ENST00000264039 PLSCR1O15162 318 aa16.19■□□□□ 0.18
GPC1-201ENST00000264039 MAFGO15525 162 aa16.19■□□□□ 0.18
GPC1-201ENST00000264039 C1QAP02745 245 aa16.19■□□□□ 0.18
GPC1-201ENST00000264039 ATF4P18848 351 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms