RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FEM1CQ96JP0 617 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 SEPT5Q99719 369 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 PDFQ9HBH1 243 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 ADA2Q9NZK5 511 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 FDXRP22570 491 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 MAPKAPK2P49137 400 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 TMED10P49755 219 aaKnown RBP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 YBEYP58557 167 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 RING1Q06587 406 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 GALNT3Q14435 633 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 OGFOD2Q6N063 350 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 FAM45BPQ6NSW5 357 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 NIPAL1Q6NVV3 410 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 CCDC80Q76M96 950 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 FAM45AQ8TCE6 357 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 CIB1Q99828 191 aa22.5■■□□□ 1.19
MCF2L-201ENST00000261963 POLR3BQ9NW08 1133 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 PTBP2Q9UKA9 531 aaKnown RBP22.5■■□□□ 1.19
MCF2L-201ENST00000261963 CDH3P22223 829 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 KCNQ1P51787 676 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 MTX3Q5HYI7 312 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 ZNF678Q5SXM1 525 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 NANOGP8Q6NSW7 305 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 RNF19BQ6ZMZ0 732 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 OR13C4Q8NGS5 318 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 ADAMTS16Q8TE57 1224 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 RPF2Q9H7B2 306 aaKnown RBP22.49■■□□□ 1.19
MCF2L-201ENST00000261963 MARCH5Q9NX47 278 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 SPATA7Q9P0W8 599 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 HCSTQ9UBK5 93 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 TRAF6Q9Y4K3 522 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 TRIM17Q9Y577 477 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 ACTL7AQ9Y615 435 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 CCDC162PA2VCL2 907 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 SLC4A1P02730 911 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 FGF1P05230 155 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 PIRTP0C851 137 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 TSPAN8P19075 237 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 UGT1A6P19224 532 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 HLA-DPA1P20036 260 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 TACR2P21452 398 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 UGT1A1P22309 533 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 UGT1A4P22310 534 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 UGT1A3P35503 534 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 UGT1A5P35504 534 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 GATMP50440 423 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 UNC50Q53HI1 259 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 LYSMD3Q7Z3D4 306 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 ZNF420Q8TAQ5 688 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-201ENST00000261963 CHPT1Q8WUD6 406 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 L3HYPDHQ96EM0 354 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 CXorf21Q9HAI6 301 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 TMEM161AQ9NX61 479 aa22.49■■□□□ 1.19
MCF2L-201ENST00000261963 A0A0D9SEW6 157 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TMX2-CTNND1H3BSU7 103 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 UBDO15205 165 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 CD3EAPO15446 510 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 ZDHHC11BP0C7U3 371 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 CD1DP15813 335 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 RHDQ02161 417 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 ATP1A4Q13733 1029 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TRIM25Q14258 630 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 SQLEQ14534 574 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 ZNF235Q14590 738 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 CLEC6AQ6EIG7 209 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TTC33Q6PID6 262 aaPredicted RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 CFAP52Q8N1V2 620 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 AFAP1L2Q8N4X5 818 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 OR52K2Q8NGK3 314 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 GPR150Q8NGU9 434 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 SPATA17Q96L03 361 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 ARMC7Q9H6L4 198 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TRPC7Q9HCX4 862 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TRNAU1APQ9NX07 287 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 UTP6Q9NYH9 597 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 SUCOQ9UBS9 1254 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 FAM32AQ9Y421 112 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 PCDHGA7Q9Y5G6 932 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TLR5O60602 858 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 ESRRBO95718 433 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 GLP2RO95838 553 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 INHBBP09529 407 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 RPL10P27635 214 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 NFKB2Q00653 900 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 GPR17Q13304 367 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 NHSL2Q5HYW2 709 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 XKR5Q6UX68 686 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 CPNE9Q8IYJ1 553 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 ZNF786Q8N393 782 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 PEX13Q92968 403 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 TRMOQ9BU70 441 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 CCDC68Q9H2F9 335 aa22.48■■□□□ 1.19
MCF2L-201ENST00000261963 MRPL40Q9NQ50 206 aaKnown RBP22.48■■□□□ 1.19
MCF2L-201ENST00000261963 H3BMQ9 156 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 EPOP01588 193 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 HDCP19113 662 aa22.47■■□□□ 1.19
MCF2L-201ENST00000261963 HOXD9P28356 352 aaPredicted RBP22.47■■□□□ 1.19
MCF2L-201ENST00000261963 ZBTB49Q6ZSB9 765 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms