RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CCDC117Q8IWD4 279 aaPredicted RBP10.07□□□□□ -0.8
PALB2-201ENST00000261584 CMTR2Q8IYT2 770 aaKnown RBP10.07□□□□□ -0.8
PALB2-201ENST00000261584 CPSF7Q8N684 471 aaKnown RBP10.07□□□□□ -0.8
PALB2-201ENST00000261584 SLC15A4Q8N697 577 aa10.07□□□□□ -0.8
PALB2-201ENST00000261584 SIDT2Q8NBJ9 832 aaKnown RBP10.07□□□□□ -0.8
PALB2-201ENST00000261584 RSPH1Q8WYR4 309 aa10.07□□□□□ -0.8
PALB2-201ENST00000261584 CCDC126Q96EE4 140 aa10.07□□□□□ -0.8
PALB2-201ENST00000261584 LINGO1Q96FE5 620 aa10.07□□□□□ -0.8
PALB2-201ENST00000261584 CINPQ9BW66 212 aaPredicted RBP10.07□□□□□ -0.8
PALB2-201ENST00000261584 SCN3BQ9NY72 215 aa10.07□□□□□ -0.8
PALB2-201ENST00000261584 RIMS3Q9UJD0 308 aa10.07□□□□□ -0.8
PALB2-201ENST00000261584 CD3EAPO15446 510 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 GOT2P00505 430 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 COL6A1P12109 1028 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 HLA-DPA1P20036 260 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CD247P20963 164 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 POLR2IP36954 125 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 GPR15P49685 360 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 RENBPP51606 427 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CLDN10P78369 228 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TAB1Q15750 504 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 C18orf21Q32NC0 220 aaPredicted RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 CYP27C1Q4G0S4 372 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 ANKRD34AQ69YU3 496 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 PGM2L1Q6PCE3 622 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TRAF7Q6Q0C0 670 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 LGI2Q8N0V4 545 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 KDM1BQ8NB78 822 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 UBASH3BQ8TF42 649 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 HMCESQ96FZ2 354 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TAS2R13Q9NYV9 303 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TCAF1Q9Y4C2 921 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CEPT1Q9Y6K0 416 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 UBR2Q8IWV8 1755 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 A0A1W2PQH9 124 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 F8W810 466 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 G3V2T6 193 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 NCAM2O15394 837 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 VPS26AO75436 327 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CNTN5O94779 1100 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 SMIM10L2AP0DMW4 78 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 SMIM10L2BP0DMW5 78 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 GABRB3P28472 473 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 WEE1P30291 646 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 HSPA7P48741 367 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TBX4P57082 545 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 BOP1Q14137 746 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 MAPKAPK3Q16644 382 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 SH2D5Q6ZV89 423 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 C14orf80Q86SX3 495 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 SMYD1Q8NB12 490 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 OR7D4Q8NG98 312 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 LRRC58Q96CX6 371 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 ASPSCR1Q9BZE9 553 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CATSPERZQ9NTU4 200 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TRMT13Q9NUP7 481 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 COMMD8Q9NX08 183 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 ZNF451Q9Y4E5 1061 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 PCDHGA7Q9Y5G6 932 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 DNMT3AQ9Y6K1 912 aaPredicted RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 NME4O00746 187 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 PGLSO95336 258 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 PBLDP30039 288 aaPredicted RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 GRK3P35626 688 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 GRM5P41594 1212 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 MAP2K4P45985 399 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CLCQ05315 142 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 HSPA14Q0VDF9 509 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 DUS1LQ6P1R4 473 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 R3HCC1LQ7Z5L2 792 aaKnown RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 TAGAPQ8N103 731 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CNIH3Q8TBE1 160 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 TMBIM1Q969X1 311 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 PYCR2Q96C36 320 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 CENPNQ96H22 339 aaPredicted RBP10.06□□□□□ -0.8
PALB2-201ENST00000261584 TMEM161AQ9NX61 479 aa10.06□□□□□ -0.8
PALB2-201ENST00000261584 H3BNH8 94 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 SLC25A27O95847 323 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 SERPIND1P05546 499 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 CAPN1P07384 714 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 CAPN3P20807 821 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 SOAT1P35610 550 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 PNPLA4P41247 253 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 SERPINB10P48595 397 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 CDK9P50750 372 aaKnown RBP10.05□□□□□ -0.8
PALB2-201ENST00000261584 DAOAP59103 153 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 TP53BP2Q13625 1128 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 PLPPR4Q7Z2D5 763 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 UNC93AQ86WB7 457 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 CLDN19Q8N6F1 224 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 Q8N9G6 341 aaPredicted RBP10.05□□□□□ -0.8
PALB2-201ENST00000261584 STYXQ8WUJ0 223 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 SEPT8Q92599 483 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 SMARCD1Q96GM5 515 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 GMLQ99445 158 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 GPR22Q99680 433 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
PALB2-201ENST00000261584 SH3BP4Q9P0V3 963 aa10.05□□□□□ -0.8
PALB2-201ENST00000261584 OGDHLQ9ULD0 1010 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms