RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ZNF347Q96SE7 839 aa10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 MUC13Q9H3R2 512 aa10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 ARMC7Q9H6L4 198 aa10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 RETREG1Q9H6L5 497 aa10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 NANOGQ9H9S0 305 aa10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 EML4Q9HC35 981 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 FNDC1Q4ZHG4 1894 aaPredicted RBP10.78□□□□□ -0.68
CHRNA1-201ENST00000261007 RNF103-CHMP3A0A140T963 221 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 A0A1W2PQ45 241 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 A0A1W2PQY0 241 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 H0YAE9 185 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 ARVCFO00192 962 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 ACOX3O15254 700 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 GPC4O75487 556 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 GPIP06744 558 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 GSTT2P0CG29 244 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 GSTT2BP0CG30 244 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC35E2BP0CK96 405 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 MBL2P11226 248 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 ATP6V1B2P21281 511 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 PSMA4P25789 261 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 RENBPP51606 427 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 PRMT2P55345 433 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 TBX4P57082 545 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 GALNT1Q10472 559 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 ITGADQ13349 1161 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 MRPL58Q14197 206 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 PKN3Q6P5Z2 889 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 CPNE9Q8IYJ1 553 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 CENPLQ8N0S6 344 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 UMODL1-AS1Q8N2C9 162 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 TTC30BQ8N4P2 665 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 SLAIN1Q8ND83 568 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 ACVR1CQ8NER5 493 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 LINC01599Q8WXQ3 324 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 CCDC126Q96EE4 140 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 MAGED4Q96JG8 741 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 SPATA17Q96L03 361 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 GPR78Q96P69 363 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 CDK5RAP1Q96SZ6 601 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 TMEM175Q9BSA9 504 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 MRPL9Q9BYD2 267 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 SLC39A8Q9C0K1 460 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 MRPL46Q9H2W6 279 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 TLR8Q9NR97 1041 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 IARS2Q9NSE4 1012 aaKnown RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 SMPD3Q9NY59 655 aaPredicted RBP10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 ABCD2Q9UBJ2 740 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 SFMBT1Q9UHJ3 866 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 PCDHB7Q9Y5E2 793 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 CORINQ9Y5Q5 1042 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 HS3ST4Q9Y661 456 aa10.77□□□□□ -0.68
CHRNA1-201ENST00000261007 KRBA1A5PL33 1030 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 J3QRK9 145 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 AQP9O43315 295 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 USP12O75317 370 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 SEC24DO94855 1032 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 ZNF182P17025 639 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 ATP5F1P24539 256 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 YWHAQP27348 245 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 SLC7A2P52569 658 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CBX2Q14781 532 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 TRIP4Q15650 581 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 SMAD1Q15797 465 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CERCAMQ5T4B2 595 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 TSTD2Q5T7W7 516 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 IGFN1Q86VF2 1251 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 ZC3H7AQ8IWR0 971 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CNTN4Q8IWV2 1026 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 MINDY1Q8N5J2 469 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CCNYL1Q8N7R7 359 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 TRPV3Q8NET8 790 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CYGBQ8WWM9 190 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 TAMM41Q96BW9 452 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 FBXL8Q96CD0 374 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 MFSD3Q96ES6 412 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 BTN2A3PQ96KV6 586 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 MYRFLQ96LU7 910 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 MRPL57Q9BQC6 102 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 FSD1LQ9BXM9 530 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 ZYG11BQ9C0D3 744 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 NAA50Q9GZZ1 169 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 NMUR1Q9HB89 426 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 TMEM248Q9NWD8 314 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CCDC167Q9P0B6 97 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 ACTR3BQ9P1U1 418 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 XPR1Q9UBH6 696 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 CPQQ9Y646 472 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 UTRNP46939 3433 aa10.77□□□□□ -0.69
CHRNA1-201ENST00000261007 SHROOM3Q8TF72 1996 aa10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 A0A087X1B8 175 aa10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 TTC24A2A3L6 582 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 TMEM233B4DJY2 109 aa10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 MSI1O43347 362 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 RAB10P61026 200 aa10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 ADARB1P78563 741 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-201ENST00000261007 RING1Q06587 406 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms