RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CHST15Q7LFX5 561 aaPredicted RBP18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 TMEM159Q96B96 161 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 RNF25Q96BH1 459 aaPredicted RBP18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 CCDC74BQ96LY2 380 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 CCDC42Q96M95 316 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 AGAP3Q96P47 875 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 LYSMD1Q96S90 227 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 MAK16Q9BXY0 300 aaKnown RBP18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 BRD8Q9H0E9 1235 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 FAM83DQ9H4H8 585 aa18.87■□□□□ 0.61
TM6SF1-201ENST00000258909 C9orf172C9J069 976 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 APOL1O14791 398 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 DNAJC6O75061 913 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 MFAP3LO75121 409 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 KRT1P04264 644 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 PIRTP0C851 137 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 PTMSP20962 102 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 GPR3P46089 330 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 PEX6Q13608 980 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 SLC9A4Q6AI14 798 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 LYSMD3Q7Z3D4 306 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 RFX6Q8HWS3 928 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 SLC37A2Q8TED4 501 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 ARFGAP3Q9NP61 516 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 KCNK4Q9NYG8 393 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 TMEM9Q9P0T7 183 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 ACSL6Q9UKU0 697 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 COL6A6A6NMZ7 2263 aa18.86■□□□□ 0.61
TM6SF1-201ENST00000258909 IGHV1OR21-1A0A087WYE8 117 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 ZW10O43264 779 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 SLC4A1P02730 911 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 TPM1P09493 284 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 LIPCP11150 499 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 CSF2RBP32927 897 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 PPM1FP49593 454 aaPredicted RBP18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 LLGL1Q15334 1064 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 PCSK7Q16549 785 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 ZNF648Q5T619 568 aaPredicted RBP18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 HENMT1Q5T8I9 393 aaKnown RBP18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 VASH2Q86V25 355 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 CCHCR1Q8TD31 782 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 PMEPA1Q969W9 287 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 EID2BQ96D98 161 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 ADGRE3Q9BY15 652 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 PKD2L2Q9NZM6 624 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 AKAP7Q9P0M2 348 aaPredicted RBP18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 SHOC2Q9UQ13 582 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 KCNK6Q9Y257 313 aa18.85■□□□□ 0.61
TM6SF1-201ENST00000258909 ZIC2O95409 532 aaPredicted RBP18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ARHGAP25P42331 645 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 LRP8Q14114 963 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ALS2CLQ60I27 953 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 JPH3Q8WXH2 748 aaPredicted RBP18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 TRIB3Q96RU7 358 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ZMYND15Q9H091 742 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 TSPY26PQ9H489 355 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 TBC1D29Q9UFV1 150 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SDK2Q58EX2 2172 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ZNF487B1APH4 448 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SNX2O60749 519 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 MTA2O94776 668 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ACP5P13686 325 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 NOP2P46087 812 aaKnown RBP18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 LIMK2P53671 638 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 PDK1Q15118 436 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SKOR2Q2VWA4 1001 aaPredicted RBP18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ODF2Q5BJF6 829 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ZNF605Q86T29 641 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 NT5DC3Q86UY8 548 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 RHOT2Q8IXI1 618 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SFRP1Q8N474 314 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SPATA22Q8NHS9 363 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 IMP4Q96G21 291 aaKnown RBP18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 WBP1Q96G27 269 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 OLFM3Q96PB7 478 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SLC38A3Q99624 504 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 ZFYVE1Q9HBF4 777 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 VPS18Q9P253 973 aa18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 SAE1Q9UBE0 346 aaPredicted RBP18.84■□□□□ 0.61
TM6SF1-201ENST00000258909 BOD1L1Q8NFC6 3051 aa18.83■□□□□ 0.61
TM6SF1-201ENST00000258909 FGF3P11487 239 aaPredicted RBP18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 NFATC2Q13469 925 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 CLPPQ16740 277 aaPredicted RBP18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 MFSD7Q6UXD7 560 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 RHOT1Q8IXI2 618 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 RAVER1Q8IY67 606 aaKnown RBP18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 GPR26Q8NDV2 337 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 OR4D9Q8NGE8 314 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 SPATA16Q9BXB7 569 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 ATXN10Q9UBB4 475 aa18.83■□□□□ 0.6
TM6SF1-201ENST00000258909 TENM4Q6N022 2769 aa18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 HGSO14964 777 aaPredicted RBP18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 PPP1R12AO14974 1030 aaPredicted RBP18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 MT-CYBP00156 380 aaPredicted RBP18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 PLA2G2AP14555 144 aa18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 COMTP21964 271 aa18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 FASLGP48023 281 aa18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 ARSDP51689 593 aa18.82■□□□□ 0.6
TM6SF1-201ENST00000258909 SNAP47Q5SQN1 464 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms