RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 POLR3EQ9NVU0 708 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MID2Q9UJV3 735 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 SRPRBQ9Y5M8 271 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 CYP46A1Q9Y6A2 500 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MYH9P35579 1960 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MAP2P11137 1827 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 FAM83GA6ND36 823 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 RCCD1A6NED2 376 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PDZK1P1A8MUH7 402 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L5A8MUK1 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L15C9J2P7 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L12C9JPN9 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L11C9JVI0 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L21D6R901 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L18D6R9N7 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L22D6RA61 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L19D6RCP7 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L20D6RJB6 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ARNTLO00327 626 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ABCD4O14678 606 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 FSCN2O14926 492 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 EFSO43281 561 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 SLC22A3O75751 556 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 NTRK1P04629 796 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 GSNP06396 782 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF888P0CJ79 500 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 AHCYP23526 432 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ADRA1BP35368 520 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 TMPOP42166 694 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 NSFP46459 744 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 GDF10P55107 478 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ERVK-25P63136 954 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 BNC1Q01954 994 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP17L24Q0WX57 530 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MESDQ14696 234 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 RRS1Q15050 365 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PSMD5Q16401 504 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 FAM109BQ6ICB4 259 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PSRC1Q6PGN9 363 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 TFAP2EQ6VUC0 442 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZC3H7AQ8IWR0 971 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 POF1BQ8WVV4 589 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 C10orf82Q8WW14 230 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PYDC1Q8WXC3 89 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 S100ZQ8WXG8 99 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PPM1MQ96MI6 270 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 PFDN5Q99471 154 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 LGMNQ99538 433 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 SERPINI1Q99574 410 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 RTKNQ9BST9 563 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ERVK-6Q9BXR3 956 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 METTL9Q9H1A3 318 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 SEMA6AQ9H2E6 1030 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 TTYH1Q9H313 450 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ZCCHC4Q9H5U6 513 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MLXIPLQ9NP71 852 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 FAM212BQ9NTI7 297 aaPredicted RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 ERVK-18Q9QC07 812 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 GLS2Q9UI32 602 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 BTNL2Q9UIR0 455 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 USP21Q9UK80 565 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 MGAT4AQ9UM21 535 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 TNPO3Q9Y5L0 923 aaKnown RBP7.72□□□□□ -1.17
GPNMB-201ENST00000258733 NPFFR2Q9Y5X5 522 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 DUSP10Q9Y6W6 482 aa7.72□□□□□ -1.17
GPNMB-201ENST00000258733 CHD4Q14839 1912 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 A0A0U1RQV5 110 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 NEDD8-MDP1E9PL57 170 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 TRAF5O00463 557 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ARHGEF9O43307 516 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 TBX1O43435 398 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 NSA2O95478 260 aaKnown RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 IL1R1P14778 569 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 TAC1P20366 129 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 GALP22466 123 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 POU1F1P28069 291 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 DDOSTP39656 456 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 MAP2K6P52564 334 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ACTR1AP61163 376 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 AP1S1P61966 158 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 TXNL4AP83876 142 aaKnown RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ILF3Q12906 894 aaKnown RBP eCLIP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 FADDQ13158 208 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ACOX1Q15067 660 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 PDK2Q15119 407 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF674Q2M3X9 581 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 AP5B1Q2VPB7 878 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 RFX4Q33E94 735 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 OGFRL1Q5TC84 451 aaPredicted RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 AFMIDQ63HM1 303 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 JMJD6Q6NYC1 403 aaPredicted RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 TOM1L2Q6ZVM7 507 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 SLC16A13Q7RTY0 426 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 APTXQ7Z2E3 356 aaKnown RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 NOXA1Q86UR1 476 aa7.71□□□□□ -1.17
GPNMB-201ENST00000258733 MCATQ8IVS2 390 aaKnown RBP7.71□□□□□ -1.17
GPNMB-201ENST00000258733 ARHGEF19Q8IW93 802 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms