RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 AGTR2P50052 363 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 ART3Q13508 389 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 CNKSR3Q6P9H4 555 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 EPGNQ6UW88 154 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 GAREM2Q75VX8 874 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 CUZD1Q86UP6 607 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 KLHL23Q8NBE8 558 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 TRIM43Q96BQ3 446 aaPredicted RBP14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 FEM1AQ9BSK4 669 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 TRIM8Q9BZR9 551 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 CXXC1Q9P0U4 656 aaPredicted RBP14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 PTPRDP23468 1912 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 GRID2O43424 1007 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 IPO13O94829 963 aaKnown RBP14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 CLCN5P51795 746 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 NRF1Q16656 503 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 CXorf57Q6NSI4 855 aaKnown RBP14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 SLC39A11Q8N1S5 342 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 PDZD8Q8NEN9 1154 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 CDK15Q96Q40 435 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 PSKH2Q96QS6 385 aa14.58□□□□□ -0.08
TRAFD1-201ENST00000257604 C1orf232A0A0U1RR37 186 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 LOC285095A0A1B0GVY8 99 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 HIDE1A8MVS5 230 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 ANKRD66B4E2M5 251 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 MATN2O00339 956 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 ZNF195O14628 629 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 SLC7A4O43246 635 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 KATNA1O75449 491 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 IL1BP01584 269 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 PIK3R1P27986 724 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 MAGEA12P43365 314 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 LEPRP48357 1165 aaKnown RBP14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CHN2P52757 468 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 C1QTNF8P60827 252 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 WDR5P61964 334 aaKnown RBP14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 MFSD4BQ5TF39 518 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CACUL1Q86Y37 369 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 RAB3IL1Q8TBN0 382 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 SORCS1Q8WY21 1168 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CMTM5Q96DZ9 223 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 TCEAL4Q96EI5 215 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 TSPAN17Q96FV3 270 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CDRT15Q96T59 188 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 MTG2Q9H4K7 406 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 ZDHHC4Q9NPG8 344 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 UBAP1Q9NZ09 502 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CIDEBQ9UHD4 219 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CD84Q9UIB8 345 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 OGDHLQ9ULD0 1010 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 COMMD3-BMI1R4GMX3 469 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 KDELR3O43731 214 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 APOA4P06727 396 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 OR4D1Q15615 310 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 AGKQ53H12 422 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 PITRM1Q5JRX3 1037 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 DET1Q7L5Y6 550 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CPNE9Q8IYJ1 553 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 SLC39A3Q9BRY0 314 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 MFSD1Q9H3U5 465 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 ABCB8Q9NUT2 735 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 DTNAQ9Y4J8 743 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 SLC30A1Q9Y6M5 507 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 MIA3Q5JRA6 1907 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 NEDD8-MDP1E9PL57 170 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 H3BNC9 293 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 LINC00032P0C843 101 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 PABPC4LP0CB38 370 aaKnown RBP14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 CD70P32970 193 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 PIK3CGP48736 1102 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 GALK1P51570 392 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 C18orf21Q32NC0 220 aaPredicted RBP14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 TMEM150AQ86TG1 271 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 HERC6Q8IVU3 1022 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 FEM1CQ96JP0 617 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 TCF25Q9BQ70 676 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 C1orf21Q9H246 121 aa14.57□□□□□ -0.08
TRAFD1-201ENST00000257604 A0A087X1B8 175 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 CLDN7O95471 211 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 PRLP01236 227 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 FOXA1P55317 472 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 NRG1Q02297 640 aaPredicted RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 TECRLQ5HYJ1 363 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 ISCA2Q86U28 154 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 TEX26Q8N6G2 289 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 KLF16Q9BXK1 252 aaPredicted RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 TDRD1Q9BXT4 1180 aaKnown RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 PDFQ9HBH1 243 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 LSM7Q9UK45 103 aaKnown RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 PKP3Q9Y446 797 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 A0A1B0GTL3 188 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 LCHNA4D1U4 455 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 MROH6A6NGR9 719 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 ZNF189O75820 626 aaPredicted RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 LPOP22079 712 aaPredicted RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 KPNA2P52292 529 aaKnown RBP14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 SMARCB1Q12824 385 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 UGT2A3Q6UWM9 527 aa14.56□□□□□ -0.08
TRAFD1-201ENST00000257604 CRIPAKQ8N1N5 446 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms