RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 GSK3BP49841 420 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 CBLBQ13191 982 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 TUSC3Q13454 348 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 ATP1A4Q13733 1029 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 LPIN1Q14693 890 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 CYHR1Q6ZMK1 362 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 RANBP9Q96S59 729 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 MCMBPQ9BTE3 642 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 THUMPD3Q9BV44 507 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 POLR1EQ9GZS1 481 aaKnown RBP13.44□□□□□ -0.26
VHL-201ENST00000256474 ALG2Q9H553 416 aa13.44□□□□□ -0.26
VHL-201ENST00000256474 NOL3O60936 208 aaKnown RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 GMNNO75496 209 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ECI2O75521 394 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ZBTB11O95625 1053 aaPredicted RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 GPX3P22352 226 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 DNAJB2P25686 324 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 IL27RAQ6UWB1 636 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 CAMK1DQ8IU85 385 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 CNTN4Q8IWV2 1026 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 MAELQ96JY0 434 aaKnown RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 SLC30A3Q99726 388 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 DGCR6LQ9BY27 220 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 TRIM15Q9C019 465 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 SMOC2Q9H3U7 446 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 IKZF3Q9UKT9 509 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 PTGES3LE9PB15 166 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 TRIM24O15164 1050 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 GSTA4O15217 222 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 CA8P35219 290 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 TRAF2Q12933 501 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 GLB1LQ6UWU2 654 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 TICAM1Q8IUC6 712 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 BPIFB6Q8NFQ5 453 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 METTL6Q8TCB7 284 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 TAS2R13Q9NYV9 303 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 GIT1Q9Y2X7 761 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 H3BNH8 94 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 LDB2O43679 373 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ZNF37AP17032 561 aaPredicted RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 ELK4P28324 431 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ZNF157P51786 506 aaPredicted RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 DNAJB13P59910 316 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ADAM17P78536 824 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 RAD51Q06609 339 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 MERTKQ12866 999 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ANKDD1AQ495B1 522 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 KIAA0408Q6ZU52 694 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 OR52B6Q8NGF0 335 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 LINGO1Q96FE5 620 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 TMEM181Q9P2C4 612 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 HSFX1Q9UBD0 423 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.43□□□□□ -0.26
VHL-201ENST00000256474 FKBPLQ9UIM3 349 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ASB1Q9Y576 335 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 ANGPTL3Q9Y5C1 460 aa13.43□□□□□ -0.26
VHL-201ENST00000256474 KCNH1O95259 989 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 HK2P52789 917 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 RFTN1Q14699 578 aaPredicted RBP13.42□□□□□ -0.26
VHL-201ENST00000256474 ABI1Q8IZP0 508 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 ATP6V0D2Q8N8Y2 350 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 IRGQQ8WZA9 623 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 DTNBP1Q96EV8 351 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 ZNF597Q96LX8 424 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 CINPQ9BW66 212 aaPredicted RBP13.42□□□□□ -0.26
VHL-201ENST00000256474 CSNK1G1Q9HCP0 422 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 ZNHIT2Q9UHR6 403 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 TRMT6Q9UJA5 497 aaKnown RBP13.42□□□□□ -0.26
VHL-201ENST00000256474 SPO11Q9Y5K1 396 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 J3QRK9 145 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 SLC7A4O43246 635 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 NOBOXO60393 691 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 SH3BGRLO75368 114 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 SLC6A2P23975 617 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 MAP4P27816 1152 aaKnown RBP13.42□□□□□ -0.26
VHL-201ENST00000256474 GDF5P43026 501 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 RGRP47804 291 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 BNIP3Q12983 259 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 DUSP4Q13115 394 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 PCBP1Q15365 356 aaKnown RBP eCLIP13.42□□□□□ -0.26
VHL-201ENST00000256474 TAF12Q16514 161 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 ERMP1Q7Z2K6 904 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 LIMS2Q7Z4I7 341 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 HS3ST5Q8IZT8 346 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 GTF3C2Q8WUA4 911 aaPredicted RBP13.42□□□□□ -0.26
VHL-201ENST00000256474 NCSTNQ92542 709 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 C12orf43Q96C57 262 aaKnown RBP13.42□□□□□ -0.26
VHL-201ENST00000256474 FBXL8Q96CD0 374 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 CDKN2AIPNLQ96HQ2 116 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 UBXN10Q96LJ8 280 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 CXorf21Q9HAI6 301 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 H0Y626 953 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 E2F6O75461 281 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 TRIM16O95361 564 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 ALBP02768 609 aa13.42□□□□□ -0.26
VHL-201ENST00000256474 RPL17P18621 184 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms