RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LYSMD1Q96S90 227 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 TCF12Q99081 682 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 POMKQ9H5K3 350 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 IL26Q9NPH9 171 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 GALPQ9UBC7 116 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 B4GALT6Q9UBX8 382 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 IL36AQ9UHA7 158 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 MED16Q9Y2X0 877 aa18.8■□□□□ 0.6
TRIM47-201ENST00000254816 TARM1B6A8C7 271 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 RHOBTB1O94844 696 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 LTA4HP09960 611 aaKnown RBP18.79■□□□□ 0.6
TRIM47-201ENST00000254816 LAMP2P13473 410 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 UGT1A6P19224 532 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 UGT1A1P22309 533 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 UGT1A4P22310 534 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 GJA4P35212 333 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 UGT1A3P35503 534 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 UGT1A5P35504 534 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 OPRD1P41143 372 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 TTPAP49638 278 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 PTSQ03393 145 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 CACNG1Q06432 222 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 DBN1Q16643 649 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 GPR26Q8NDV2 337 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 UBXN10Q96LJ8 280 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 C7orf26Q96N11 449 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 TBC1D10AQ9BXI6 508 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 ASB8Q9H765 288 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 CORO1CQ9ULV4 474 aaPredicted RBP18.79■□□□□ 0.6
TRIM47-201ENST00000254816 SERPINE1P05121 402 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 FAM83EQ2M2I3 478 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 TSNAXIP1Q2TAA8 658 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 FNDC3BQ53EP0 1204 aaKnown RBP18.79■□□□□ 0.6
TRIM47-201ENST00000254816 CTSL3PQ5NE16 218 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 ZYG11AQ6WRX3 759 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 LCA5Q86VQ0 697 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 LONP2Q86WA8 852 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 SCG3Q8WXD2 468 aaKnown RBP18.79■□□□□ 0.6
TRIM47-201ENST00000254816 CHFRQ96EP1 664 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 MCCC1Q96RQ3 725 aaPredicted RBP18.79■□□□□ 0.6
TRIM47-201ENST00000254816 CCDC68Q9H2F9 335 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 THAP1Q9NVV9 213 aa18.79■□□□□ 0.6
TRIM47-201ENST00000254816 TICRRQ7Z2Z1 1910 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 APOA4P06727 396 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 EZRP15311 586 aaKnown RBP18.78■□□□□ 0.6
TRIM47-201ENST00000254816 PSMC3P17980 439 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 GDI1P31150 447 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 ZBTB16Q05516 673 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 PDAP1Q13442 181 aaKnown RBP18.78■□□□□ 0.6
TRIM47-201ENST00000254816 CHRNA6Q15825 494 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 SETMARQ53H47 684 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-201ENST00000254816 PHTF2Q8N3S3 785 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 CPA6Q8N4T0 437 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 INPP5DQ92835 1189 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 ARL8BQ9NVJ2 186 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 OXSMQ9NWU1 459 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 PIKFYVEQ9Y2I7 2098 aa18.78■□□□□ 0.6
TRIM47-201ENST00000254816 ATG2BQ96BY7 2078 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 GLYATL1P3A0A0U1RQE8 302 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 NIPSNAP2O75323 286 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 IL1BP01584 269 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 C1SP09871 688 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 LTBRP36941 435 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 SPAM1P38567 509 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 TECRLQ5HYJ1 363 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 AGAP9Q5VTM2 703 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 TTC7BQ86TV6 843 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 SERPINA9Q86WD7 417 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 TERB1Q8NA31 727 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 SLC30A3Q99726 388 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 BOCQ9BWV1 1114 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 MRPL46Q9H2W6 279 aaKnown RBP18.77■□□□□ 0.6
TRIM47-201ENST00000254816 TBC1D3BA6NDS4 549 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 NEMP2A6NFY4 417 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 IQCF5A8MTL0 148 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 DLX3O60479 287 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 TRIM13O60858 407 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 METAP1P53582 386 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 POLR2LP62875 67 aaKnown RBP18.77■□□□□ 0.6
TRIM47-201ENST00000254816 AARS2Q5JTZ9 985 aaKnown RBP18.77■□□□□ 0.6
TRIM47-201ENST00000254816 CRLF3Q8IUI8 442 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 STK40Q8N2I9 435 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 OR6Y1Q8NGX8 325 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 PBXIP1Q96AQ6 731 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 SKA1Q96BD8 255 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 GPR21Q99679 349 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 MRPL57Q9BQC6 102 aaKnown RBP18.77■□□□□ 0.6
TRIM47-201ENST00000254816 GATA5Q9BWX5 397 aaPredicted RBP18.77■□□□□ 0.6
TRIM47-201ENST00000254816 CD84Q9UIB8 345 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 SARDHQ9UL12 918 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 ANKRD12Q6UB98 2062 aa18.77■□□□□ 0.6
TRIM47-201ENST00000254816 TGDSO95455 350 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 PKMP14618 531 aaKnown RBP18.76■□□□□ 0.59
TRIM47-201ENST00000254816 TIMP2P16035 220 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ZNF37AP17032 561 aaPredicted RBP18.76■□□□□ 0.59
TRIM47-201ENST00000254816 CCR10P46092 362 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 VASPP50552 380 aaPredicted RBP18.76■□□□□ 0.59
TRIM47-201ENST00000254816 SUOXP51687 545 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 NFATC2Q13469 925 aa18.76■□□□□ 0.59
TRIM47-201ENST00000254816 ZNF234Q14588 700 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms