RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ABRAXAS1Q6UWZ7 409 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 LBX2Q6XYB7 198 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 HPS6Q86YV9 775 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 TEX47Q8TBZ9 253 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 CPT1BQ92523 772 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 MAML3Q96JK9 1138 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 SALL4Q9UJQ4 1053 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 C3orf18Q9UK00 162 aa18.62■□□□□ 0.57
SMARCC1-201ENST00000254480 LRIG2O94898 1065 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 PRAMEF1O95521 474 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 PKMP14618 531 aaKnown RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 FOLH1Q04609 750 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 BHLHB9Q6PI77 547 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 KLHL24Q6TFL4 600 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 PTCHD4Q6ZW05 846 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ANKRD46Q86W74 232 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ZBTB2Q8N680 514 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 FSBPO95073 299 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 NUDT17P0C025 328 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 AKT2P31751 481 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ZNF132P52740 706 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 CLP1Q92989 425 aaKnown RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 TCF25Q9BQ70 676 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ALG2Q9H553 416 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 TMCO1Q9UM00 188 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ADARP55265 1226 aaKnown RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ILF2Q12905 390 aaKnown RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 BROXQ5VW32 411 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ESRP1Q6NXG1 681 aaKnown RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 TRIM40Q6P9F5 258 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 OMA1Q96E52 524 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 SPATA5L1Q9BVQ7 753 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 TMEM138Q9NPI0 162 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 GTF2IRD1Q9UHL9 959 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ERGIC3Q9Y282 383 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 PRMT5O14744 637 aaPredicted RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 BIRC5O15392 142 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC31A1O15431 190 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 SEPT4O43236 478 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 PSIP1O75475 530 aaKnown RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 STX11O75558 287 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ARF5P84085 180 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ZCCHC10Q8TBK6 192 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 PSMG2Q969U7 264 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 RCVRNP35243 200 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 CAPN13Q6MZZ7 669 aaPredicted RBP18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 CHSY3Q70JA7 882 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 HOMEZQ8IX15 550 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ZNF567Q8N184 647 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 SCAMP5Q8TAC9 235 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 FNIP1Q8TF40 1166 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 ART5Q96L15 291 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 EFR3BQ9Y2G0 817 aa18.61■□□□□ 0.57
SMARCC1-201ENST00000254480 KCNU1A8MYU2 1149 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 G3V2T6 193 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 FGBP02675 491 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 C12orf56Q8IXR9 622 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 ZMYND8Q9ULU4 1186 aaPredicted RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 TPST2O60704 377 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 CCNA2P20248 432 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 ADSSP30520 456 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 CDKN2BP42772 138 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 CASP9P55211 416 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 CCL14Q16627 93 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 APLFQ8IW19 511 aaPredicted RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 SIDT2Q8NBJ9 832 aaKnown RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 GPN3Q9UHW5 284 aaPredicted RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 TTC23Q5W5X9 447 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 AP2M1Q96CW1 435 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 NMUR2Q9GZQ4 415 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 RPRD1BQ9NQG5 326 aaKnown RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 CPQQ9Y646 472 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 FAM149AA5PLN7 773 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 QSOX1O00391 747 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 ARL2P36404 184 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 PURAQ00577 322 aaKnown RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 C2orf80Q0P641 193 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 KDM4FA0A1W2PPD8 638 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 ATG13O75143 517 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 SEC24AO95486 1093 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 ITGA2P17301 1181 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 NT5EP21589 574 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 TTC27Q6P3X3 843 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 TWIST2Q8WVJ9 160 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 PIH1D2Q8WWB5 315 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 APOBEC3GQ9HC16 384 aaKnown RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 MCUBQ9NWR8 336 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 DUS2Q9NX74 493 aaKnown RBP18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 GGA2Q9UJY4 613 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 DERAQ9Y315 318 aa18.6■□□□□ 0.57
SMARCC1-201ENST00000254480 FADS2O95864 444 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 LAG3P18627 525 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 HGSNATQ68CP4 663 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 OR2T12Q8NG77 320 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 EDF1O60869 148 aaKnown RBP18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 SERPINB7O75635 380 aa18.59■□□□□ 0.57
SMARCC1-201ENST00000254480 LILRA4P59901 499 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms