RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 GPR15P49685 360 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 C18orf21Q32NC0 220 aaPredicted RBP11.91□□□□□ -0.5
USHBP1-201ENST00000252597 DCLRE1AQ6PJP8 1040 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 IL27RAQ6UWB1 636 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 C2CD4AQ8NCU7 369 aaPredicted RBP11.91□□□□□ -0.5
USHBP1-201ENST00000252597 FAM162AQ96A26 154 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 EGFL8Q99944 293 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 SLC2A11Q9BYW1 496 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 ANKRD60Q9BZ19 345 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 HIPK3Q9H422 1215 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 TMEM181Q9P2C4 612 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 ZNHIT2Q9UHR6 403 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 EIF2B4Q9UI10 523 aaKnown RBP11.91□□□□□ -0.5
USHBP1-201ENST00000252597 ANGPTL3Q9Y5C1 460 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 PARP14Q460N5 1801 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 TCRBV3S1A0A5B6 114 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 CCDC162PA2VCL2 907 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 M0R3G1 203 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 PTGESO14684 152 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 MAFKO60675 156 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 IMPDH1P20839 514 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 PSMB9P28065 219 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 CDKN1CP49918 316 aaPredicted RBP11.91□□□□□ -0.5
USHBP1-201ENST00000252597 CLCQ05315 142 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 CHRNB3Q05901 458 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 ZBTB6Q15916 424 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 PTPRNQ16849 979 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 RGS21Q2M5E4 152 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 PAGE2BQ5JRK9 111 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 UGT3A1Q6NUS8 523 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 FRA10AC1Q70Z53 315 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 BTLAQ7Z6A9 289 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 ITIH5Q86UX2 942 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 METTL6Q8TCB7 284 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 HPS1Q92902 700 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 CCM2LQ9NUG4 571 aaPredicted RBP11.91□□□□□ -0.5
USHBP1-201ENST00000252597 ZNF510Q9Y2H8 683 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 SBF1O95248 1867 aa11.91□□□□□ -0.5
USHBP1-201ENST00000252597 UNC80Q8N2C7 3258 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 A0A1W2PQH9 124 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 MATN3O15232 486 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 XPNPEP2O43895 674 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 DIRAS1O95057 198 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ADSLP30566 484 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 CAPGP40121 348 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 MTHFRP42898 656 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 CLCN5P51795 746 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 SEMG2Q02383 582 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ALFQ53S48 1182 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ANKS6Q68DC2 871 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ELMSAN1Q6PJG2 1045 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 BORCS5Q969J3 196 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 BIRC7Q96CA5 298 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 GPR21Q99679 349 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 MYOCQ99972 504 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 SPC25Q9HBM1 224 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 INVSQ9Y283 1065 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 SQORQ9Y6N5 450 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 A0A0G2JLL6 359 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 A0A1W2PQ67 120 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 E9PAM4 449 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 IMPDH2P12268 514 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 SLC2A4P14672 509 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 EFNA1P20827 205 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 GRK4P32298 578 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 SEPHS1P49903 392 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 PFKPQ01813 784 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 RFTN1Q14699 578 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ACAP2Q15057 778 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 PYCR3Q53H96 274 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 TMTC4Q5T4D3 741 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 NANOGP8Q6NSW7 305 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 CRTC3Q6UUV7 619 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 GCNT7Q6ZNI0 430 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 LARP4Q71RC2 724 aaKnown RBP eCLIP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 R3HCC1LQ7Z5L2 792 aaKnown RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 PRRT2Q7Z6L0 340 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-201ENST00000252597 ANKRD46Q86W74 232 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 TRPV3Q8NET8 790 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 SLC2A13Q96QE2 648 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 FCRL5Q96RD9 977 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 MEAF6Q9HAF1 191 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 VPS45Q9NRW7 570 aa11.9□□□□□ -0.5
USHBP1-201ENST00000252597 PSMD3O43242 534 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ESRRBO95718 433 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 FUCA1P04066 466 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 AGXTP21549 392 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 GPX3P22352 226 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 OR1E1P30953 314 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ALDH3B2P48448 385 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 MADCAM1Q13477 382 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 SLC39A12Q504Y0 691 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 ZDHHC13Q8IUH4 622 aa11.89□□□□□ -0.51
USHBP1-201ENST00000252597 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms