RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 BTN3A1O00481 513 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 GABRR2P28476 465 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 PTK2BQ14289 1009 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 GAREM2Q75VX8 874 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 MFN1Q8IWA4 741 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 FBXO39Q8N4B4 442 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 FAM156AQ8NDB6 213 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 DDI1Q8WTU0 396 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 NAT14Q8WUY8 206 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 EEF1AKMT1Q8WVE0 214 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 ECSITQ9BQ95 431 aa21.55■■□□□ 1.04
CLN6-201ENST00000249806 SEMA4BQ9NPR2 832 aaPredicted RBP21.55■■□□□ 1.04
CLN6-201ENST00000249806 FBP2O00757 339 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 LATS1O95835 1130 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 TSPAN12O95859 305 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 OLFM2O95897 454 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 PYGLP06737 847 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 FGF4P08620 206 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 ALDOCP09972 364 aaKnown RBP21.54■■□□□ 1.04
CLN6-201ENST00000249806 TCN1P20061 433 aaPredicted RBP21.54■■□□□ 1.04
CLN6-201ENST00000249806 CHRM3P20309 590 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 GKP32189 559 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 XIAPP98170 497 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 CLCQ05315 142 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 CDC16Q13042 620 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 LYSMD3Q7Z3D4 306 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 HS6ST3Q8IZP7 471 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 YY1AP1Q9H869 796 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 SARS2Q9NP81 518 aaKnown RBP21.54■■□□□ 1.04
CLN6-201ENST00000249806 IL17CQ9P0M4 197 aa21.54■■□□□ 1.04
CLN6-201ENST00000249806 DNMT3BQ9UBC3 853 aaKnown RBP21.54■■□□□ 1.04
CLN6-201ENST00000249806 NRG2O14511 850 aaPredicted RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 AZIN1O14977 448 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 VPS26AO75436 327 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 CSF2RAP15509 400 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 AGTR2P50052 363 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 ATP6V0D1P61421 351 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 KLC1Q07866 573 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 FLOT2Q14254 428 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 MMEL1Q495T6 779 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 PAOXQ6QHF9 649 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 TWIST2Q8WVJ9 160 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 MYCBPQ99417 103 aaPredicted RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 GPR63Q9BZJ6 419 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 TUBB1Q9H4B7 451 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 ZNF711Q9Y462 761 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 ABHD14A-ACY1A0A1B0GW23 586 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 H7C0S8 307 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 PIP5K1BO14986 540 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 GJA1P17302 382 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 LAG3P18627 525 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 PABPC1LQ4VXU2 614 aaKnown RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 TPGS1Q6ZTW0 290 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 NKAPQ8N5F7 415 aaKnown RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 CD200R1Q8TD46 325 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 MICAL1Q8TDZ2 1067 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 ESAMQ96AP7 390 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 CCDC97Q96F63 343 aaPredicted RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 DOCK6Q96HP0 2047 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 ASB2Q96Q27 587 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 EVLQ9UI08 416 aaPredicted RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 TRMT6Q9UJA5 497 aaKnown RBP21.53■■□□□ 1.04
CLN6-201ENST00000249806 VPS9D1Q9Y2B5 631 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 PKP3Q9Y446 797 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 PCDHGA7Q9Y5G6 932 aa21.53■■□□□ 1.04
CLN6-201ENST00000249806 CKMP06732 381 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 ME2P23368 584 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 PEX2P28328 305 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 ECT2LQ008S8 904 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 STX5Q13190 355 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 REP15Q6BDI9 236 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 ITIH5Q86UX2 942 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 BBS7Q8IWZ6 715 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 DCAF4L2Q8NA75 395 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 PIH1D2Q8WWB5 315 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 CACNA2D2Q9NY47 1150 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 ADA2Q9NZK5 511 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 TGM5O43548 720 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 SNRPB2P08579 225 aaKnown RBP21.52■■□□□ 1.04
CLN6-201ENST00000249806 CNPP09543 421 aaKnown RBP21.52■■□□□ 1.04
CLN6-201ENST00000249806 HMGCLP35914 325 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 NME5P56597 212 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 PSME3P61289 254 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 LRP8Q14114 963 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 ARMC12Q5T9G4 340 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 KANK2Q63ZY3 851 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 DDIASQ8IXT1 998 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 CPNE9Q8IYJ1 553 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 GDPD5Q8WTR4 605 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 LINGO1Q96FE5 620 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 SAGE1Q9NXZ1 904 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 HACD3Q9P035 362 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 BTRCQ9Y297 605 aa21.52■■□□□ 1.04
CLN6-201ENST00000249806 E5RI56 91 aa21.51■■□□□ 1.03
CLN6-201ENST00000249806 PFDN6O15212 129 aa21.51■■□□□ 1.03
CLN6-201ENST00000249806 SMNDC1O75940 238 aaKnown RBP eCLIP21.51■■□□□ 1.03
CLN6-201ENST00000249806 PGLSO95336 258 aa21.51■■□□□ 1.03
CLN6-201ENST00000249806 LINC00032P0C843 101 aa21.51■■□□□ 1.03
CLN6-201ENST00000249806 ACRP10323 421 aa21.51■■□□□ 1.03
CLN6-201ENST00000249806 PRDX3P30048 256 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms