RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CYP2R1Q6VVX0 501 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 FAM126BQ8IXS8 530 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 GALNT4Q8N4A0 578 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 SEPT8Q92599 483 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 PLD4Q96BZ4 506 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 TCF12Q99081 682 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 BPIFA1Q9NP55 256 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 FNDC3AQ9Y2H6 1198 aaKnown RBP19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 AP4S1Q9Y587 144 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 AK5Q9Y6K8 562 aa19.43■□□□□ 0.7
CDC42EP1-201ENST00000249014 ANAPC1Q9H1A4 1944 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 A0A1B0GVM2 712 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 NCF1BA6NI72 391 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 NCF1CA8MVU1 366 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 ANKRD66B4E2M5 251 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 NIPSNAP2O75323 286 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 NCF1P14598 390 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 CAPN3P20807 821 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 LPOP22079 712 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 AGTR2P50052 363 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 GK3PQ14409 553 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 SAMD4BQ5PRF9 694 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 THEMIS2Q5TEJ8 643 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 ISLR2Q6UXK2 745 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 PDZD8Q8NEN9 1154 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TUBGCP3Q96CW5 907 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 SLC45A3Q96JT2 553 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 MRPL9Q9BYD2 267 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TANC1Q9C0D5 1861 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 EME2A4GXA9 379 aaPredicted RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 SNAP91O60641 907 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TSPAN12O95859 305 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 RPS17P08708 135 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 PRDX3P30048 256 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 MC4RP32245 332 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TUFMP49411 452 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 ATP6V0D1P61421 351 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TRAF2Q12933 501 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 BFSP2Q13515 415 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 VPS26BQ4G0F5 336 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 CTSL3PQ5NE16 218 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 EFHBQ8N7U6 833 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 SIDT2Q8NBJ9 832 aaKnown RBP19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 LRTOMTQ8WZ04 291 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 OVCA2Q8WZ82 227 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 HHIPL1Q96JK4 782 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 SEMA6AQ9H2E6 1030 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 CWH43Q9H720 699 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TIMM22Q9Y584 194 aa19.42■□□□□ 0.7
CDC42EP1-201ENST00000249014 TCRBV3S1A0A5B6 114 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 C2orf78A6NCI8 922 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 BTN3A1O00481 513 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 AHCYL1O43865 530 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 EFEMP2O95967 443 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 HGFP14210 728 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 HOXD10P28358 340 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 C6orf52Q5T4I8 152 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 ADGRF1Q5T601 910 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 CHST9Q7L1S5 443 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 MIER2Q8N344 545 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 SPDYE1Q8NFV5 336 aaPredicted RBP19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 PXYLP1Q8TE99 480 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 ROPN1LQ96C74 230 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 GPATCH1Q9BRR8 931 aaKnown RBP19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 MUC3BQ9H195 1237 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 IL1RL2Q9HB29 575 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 ZNF225Q9UK10 706 aa19.41■□□□□ 0.7
CDC42EP1-201ENST00000249014 SCAMP3O14828 347 aaKnown RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 GPR39O43194 453 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 TMCC1O94876 653 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 CSPG5O95196 566 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 SMIM18P0DKX4 95 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 PKMP14618 531 aaKnown RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 ZNF26P17031 533 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 YBX1P67809 324 aaKnown RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 ANKS6Q68DC2 871 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 NAIF1Q69YI7 327 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 PIP4K2CQ8TBX8 421 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 CNBD2Q96M20 576 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 Q9H521 79 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 HMX1Q9NP08 348 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 SDR39U1Q9NRG7 319 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 PAPOLBQ9NRJ5 636 aaKnown RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 BBIP1A8MTZ0 92 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 HOXA2O43364 376 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 LBPP18428 481 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 HK3P52790 923 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 UGT3A1Q6NUS8 523 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 HERC6Q8IVU3 1022 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 PCYOX1LQ8NBM8 494 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 ZNF483Q8TF39 744 aaPredicted RBP19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 ESAMQ96AP7 390 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 SCLYQ96I15 445 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 CENPKQ9BS16 269 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 ASB1Q9Y576 335 aa19.4■□□□□ 0.7
CDC42EP1-201ENST00000249014 NME4O00746 187 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 KLK8O60259 260 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 C1RP00736 705 aa19.39■□□□□ 0.69
CDC42EP1-201ENST00000249014 PYGLP06737 847 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms