RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 D6RAR5 112 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 NTN3O00634 580 aaPredicted RBP20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 FGF1P05230 155 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 PTMAP06454 111 aaKnown RBP20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 RBL1P28749 1068 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 CETN2P41208 172 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 PDX1P52945 283 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 OTUD4Q01804 1114 aaKnown RBP20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 XRCC4Q13426 336 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 BIRC2Q13490 618 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 COL28A1Q2UY09 1125 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 PYCR3Q53H96 274 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 ZNF569Q5MCW4 686 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 KDELC1Q6UW63 502 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 PEX26Q7Z412 305 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 SLC25A41Q8N5S1 370 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 GPR26Q8NDV2 337 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 IPMKQ8NFU5 416 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 ACTL9Q8TC94 416 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 ALG3Q92685 438 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 SCARF2Q96GP6 870 aaPredicted RBP20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 FERMT1Q9BQL6 677 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 LRRN3Q9H3W5 708 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 ARFGAP3Q9NP61 516 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 AMFRQ9UKV5 643 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 CNOT6Q9ULM6 557 aaKnown RBP20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 PRKAB1Q9Y478 270 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 SPO11Q9Y5K1 396 aa20.98■□□□□ 0.95
HCFC1R1-201ENST00000248089 A0A1W2PQM1 296 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 ECEL1O95672 775 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 PTPN7P35236 360 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 CHRNA4P43681 627 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 LSSP48449 732 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 EIF3EP60228 445 aaKnown RBP20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 TBC1D25Q3MII6 688 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 TMC3Q7Z5M5 1100 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 SPRED1Q7Z699 444 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 B3GNT8Q7Z7M8 397 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 CDKL3Q8IVW4 592 aaPredicted RBP20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 PATE1Q8WXA2 126 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 OXNAD1Q96HP4 312 aaPredicted RBP20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 FCRL5Q96RD9 977 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 FOXP3Q9BZS1 431 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 EPB41L5Q9HCM4 733 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 RAD18Q9NS91 495 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 VPS18Q9P253 973 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 APPL1Q9UKG1 709 aa20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 ATXN7L1Q9ULK2 861 aaPredicted RBP20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 PACSIN2Q9UNF0 486 aaPredicted RBP20.97■□□□□ 0.95
HCFC1R1-201ENST00000248089 BPTFQ12830 3046 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 RHPN2P1A8MT19 583 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 AURKAO14965 403 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 NUDT21O43809 227 aaKnown RBP20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 FTCDO95954 541 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 PYGMP11217 842 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 DCDC1P59894 354 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 PEX6Q13608 980 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 SIRPB2Q5JXA9 342 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 CHST15Q7LFX5 561 aaPredicted RBP20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 SYCE1Q8N0S2 351 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 LSMEM2Q8N112 164 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 UBL4BQ8N7F7 174 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 FGF11Q92914 225 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 GRAMD1AQ96CP6 724 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 MRGPRX2Q96LB1 330 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 ZSCAN5AQ9BUG6 496 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 FSD1LQ9BXM9 530 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 GBA3Q9H227 469 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 BPIFA1Q9NP55 256 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 TRHDEQ9UKU6 1024 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 EFR3BQ9Y2G0 817 aa20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 PCYT1BQ9Y5K3 369 aaPredicted RBP20.96■□□□□ 0.95
HCFC1R1-201ENST00000248089 A0A087WV48 116 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 A0A1W2PNU3 283 aaPredicted RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 PMS2P1A4D2B8 440 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 RRP8O43159 456 aaKnown RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 DNAJC6O75061 913 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 TJP3O95049 919 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 PNLIPP16233 465 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 BPIP17213 487 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 EIF2S3P41091 472 aaKnown RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 MPP3Q13368 585 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 LRP8Q14114 963 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 ZNF648Q5T619 568 aaPredicted RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 DARS2Q6PI48 645 aaKnown RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 LRRC69Q6ZNQ3 347 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 NAGSQ8N159 534 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 ARL14Q8N4G2 192 aa20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 SNIP1Q8TAD8 396 aaKnown RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 SRPK1Q96SB4 655 aaKnown RBP20.95■□□□□ 0.94
HCFC1R1-201ENST00000248089 CCDC187A0A096LP49 1063 aa20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 LOC285095A0A1B0GVY8 99 aa20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 KCNN4O15554 427 aa20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 STK10O94804 968 aaKnown RBP20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 SLC25A14O95258 325 aaPredicted RBP20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 RBP3P10745 1247 aa20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 ACP5P13686 325 aa20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 RBMS1P29558 406 aaKnown RBP20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 ABCG1P45844 678 aa20.94■□□□□ 0.94
HCFC1R1-201ENST00000248089 INHBCP55103 352 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms