RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MEIS2O14770 477 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 C2P06681 752 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CRHR1P34998 444 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PPP2R2BQ00005 443 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 DEFA5Q01523 94 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 FAM187BQ17R55 369 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 XYLT1Q86Y38 959 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PANX1Q96RD7 426 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TCF25Q9BQ70 676 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 NAT9Q9BTE0 207 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 FAM126AQ9BYI3 521 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 C12orf4Q9NQ89 552 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 SLC7A8Q9UHI5 535 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 MEN1O00255 615 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CD3EAPO15446 510 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 ENTPD1P49961 510 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TFAP2BQ92481 460 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 SSR3Q9UNL2 185 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 RFXANKO14593 260 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 APOL3O95236 402 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ANGPTL1O95841 491 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CDH12P55289 794 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 SNRPFP62306 86 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 SNRPD2P62316 118 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 OR2T12Q8NG77 320 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PHF10Q8WUB8 498 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 SENP8Q96LD8 212 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ADGRB2O60241 1585 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 EI24O14681 340 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ENTPD3O75355 529 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 RIPK1Q13546 671 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 EIF1ADQ8N9N8 165 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 FAM98AQ8NCA5 519 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 MYLPFQ96A32 169 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 C8orf4Q9NR00 106 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PHF11Q9UIL8 331 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 RTN3O95197 1032 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 CCNYL3P0C7X3 344 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ATP5F1P24539 256 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 INO80DQ53TQ3 878 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 HECTD2Q5U5R9 776 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 IGDCC3Q8IVU1 814 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TMEM161BQ8NDZ6 487 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 GPRC5AQ8NFJ5 357 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 S100ZQ8WXG8 99 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CAMKK2Q96RR4 588 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CCDC3Q9BQI4 270 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CCDC28BQ9BUN5 200 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CRNNQ9UBG3 495 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 UBA2Q9UBT2 640 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 PTPRZ1P23471 2315 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 XYLBO75191 536 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 JAM2P57087 298 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TOP3AQ13472 1001 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 HYAL4Q2M3T9 481 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PCID2Q5JVF3 399 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 IDNKQ5T6J7 187 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ZDHHC18Q9NUE0 388 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 C14orf119Q9NWQ9 140 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 GGA2Q9UJY4 613 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TNS2Q63HR2 1409 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 A0A1W2PPW3 197 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CYP2A7P20853 494 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PRKCIP41743 596 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 VCPIP1Q96JH7 1222 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 FRMD6Q96NE9 622 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 EPB41L4BQ9H329 900 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 DIP2BQ9P265 1576 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 DOCK9Q9BZ29 2069 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TMEM63AO94886 807 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 CTSKP43235 329 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 GCNT1Q02742 428 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 MTAPQ13126 283 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PSMD5Q16401 504 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ESRP1Q6NXG1 681 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 RAB43Q86YS6 212 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 DEPDC4Q8N2C3 294 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 RGS17Q9UGC6 210 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 TRHDEQ9UKU6 1024 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ING4Q9UNL4 249 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 INTS1Q8N201 2190 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 EFCAB9A8MZ26 197 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 HAT1O14929 419 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PRLP01236 227 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 LRG1P02750 347 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 MC4RP32245 332 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 PIGZQ86VD9 579 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 HEXDCQ8WVB3 486 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 TTYH2Q9BSA4 534 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 GATA5Q9BWX5 397 aaPredicted RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 PCDH18Q9HCL0 1135 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 MAZP56270 477 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 IRF8Q02556 426 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 FNDC3BQ53EP0 1204 aaKnown RBP7.49□□□□□ -1.21
RIF1-201ENST00000243326 MZT2AQ6P582 158 aa7.49□□□□□ -1.21
RIF1-201ENST00000243326 ZNF432O94892 652 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 NDUFA5Q16718 116 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 GSTA3Q16772 222 aa7.48□□□□□ -1.21
RIF1-201ENST00000243326 AAGABQ6PD74 315 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms