RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SNX20Q7Z614 316 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 SPNS2Q8IVW8 549 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 EXT2Q93063 718 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 PPP1R36Q96LQ0 422 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 CPEB1Q9BZB8 566 aaKnown RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 P2RY12Q9H244 342 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 TMCO1Q9UM00 188 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 MKI67P46013 3256 aaKnown RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 A0A1W2PQ67 120 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 CLASP2O75122 1294 aaKnown RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 PRAMEF1O95521 474 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 POU2F2P09086 479 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 COX4I1P13073 169 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 GFAPP14136 432 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 ZNF7P17097 686 aaPredicted RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 CHRM3P20309 590 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 STK19P49842 368 aaPredicted RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 PTPN5P54829 565 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 IL2P60568 153 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 UNC50Q53HI1 259 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 PRSS36Q5K4E3 855 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 C6orf163Q5TEZ5 329 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 PDE12Q6L8Q7 609 aaKnown RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 SCUBE1Q8IWY4 988 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 C7orf61Q8IZ16 206 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 CBARPQ8N350 705 aaPredicted RBP23.12■■□□□ 1.29
MSX2-201ENST00000239243 FBXO27Q8NI29 283 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 RIN3Q8TB24 985 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 GRIN3AQ8TCU5 1115 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 RNPEPL1Q9HAU8 725 aa23.12■■□□□ 1.29
MSX2-201ENST00000239243 TMEM233B4DJY2 109 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 UBXN8O00124 270 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 NIPSNAP2O75323 286 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 THRAP10827 490 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 MTHFD2P13995 350 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 GKP32189 559 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 IRS1P35568 1242 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 CPOXP36551 454 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 GRAMD4Q6IC98 578 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 POU5F2Q8N7G0 328 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 OSBPL1AQ9BXW6 950 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 MEAF6Q9HAF1 191 aa23.11■■□□□ 1.29
MSX2-201ENST00000239243 PEX11AO75192 247 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 CIB2O75838 187 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 POP4O95707 220 aaKnown RBP23.1■■□□□ 1.29
MSX2-201ENST00000239243 TYRP14679 529 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 CDKN3Q16667 212 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 USP45Q70EL2 814 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 CD200R1Q8TD46 325 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ACTRT2Q8TDY3 377 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ECHDC3Q96DC8 303 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 FAM161BQ96MY7 647 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ZNF641Q96N77 438 aaPredicted RBP23.1■■□□□ 1.29
MSX2-201ENST00000239243 SUV39H2Q9H5I1 410 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ZNF106Q9H2Y7 1883 aaKnown RBP23.1■■□□□ 1.29
MSX2-201ENST00000239243 A0A0U1RQS6 177 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 SUPT3HB4E1H0 165 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 SDHDO14521 159 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 SLC9A3R1O14745 358 aaPredicted RBP23.1■■□□□ 1.29
MSX2-201ENST00000239243 SUPT3HO75486 399 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 JUNP05412 331 aaKnown RBP23.1■■□□□ 1.29
MSX2-201ENST00000239243 RPS3P23396 243 aaKnown RBP eCLIP23.1■■□□□ 1.29
MSX2-201ENST00000239243 INHBCP55103 352 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ECT2LQ008S8 904 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 PFKFB4Q16877 469 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 GPR33Q49SQ1 333 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ACCSLQ4AC99 568 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 CARD16Q5EG05 197 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 FAM151BQ6UXP7 276 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 RBFAQ8N0V3 343 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 FBXO39Q8N4B4 442 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 CFAP61Q8NHU2 1237 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 THTPAQ9BU02 230 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 SLC2A11Q9BYW1 496 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 CLPBQ9H078 707 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ZNF385DQ9H6B1 395 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 ASB8Q9H765 288 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 DCLRE1BQ9H816 532 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 PPIL1Q9Y3C6 166 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 TRAF6Q9Y4K3 522 aa23.1■■□□□ 1.29
MSX2-201ENST00000239243 DOCK6Q96HP0 2047 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 CLDN7O95471 211 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 SPAM1P38567 509 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 NFATC2Q13469 925 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 CAMK1Q14012 370 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 SIDT2Q8NBJ9 832 aaKnown RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 RP9Q8TA86 221 aaKnown RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 SCRN2Q96FV2 425 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 RTKNQ9BST9 563 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 MARK1Q9P0L2 795 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 GLYATL1P3A0A0U1RQE8 302 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 RGSL1A5PLK6 1076 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 BTN3A1O00481 513 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 ENTPD5O75356 428 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 PIK3R1P27986 724 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 BTKQ06187 659 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 TSNQ15631 228 aaKnown RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 ASTLQ6HA08 431 aaPredicted RBP23.09■■□□□ 1.29
MSX2-201ENST00000239243 TXNDC11Q6PKC3 985 aa23.09■■□□□ 1.29
MSX2-201ENST00000239243 TPRG1Q6ZUI0 275 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms