RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 CDKN2AIPNLQ96HQ2 116 aa18.63■□□□□ 0.57
CPSF3-201ENST00000238112 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
CPSF3-201ENST00000238112 ADI1Q9BV57 179 aa18.63■□□□□ 0.57
CPSF3-201ENST00000238112 SMOXQ9NWM0 555 aa18.63■□□□□ 0.57
CPSF3-201ENST00000238112 RIMKLBQ9ULI2 386 aa18.63■□□□□ 0.57
CPSF3-201ENST00000238112 DOCK4Q8N1I0 1966 aa18.63■□□□□ 0.57
CPSF3-201ENST00000238112 SYCE1LA8MT33 242 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 PRSS56P0CW18 603 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 DIO3P55073 304 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 CDH15P55291 814 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 HPCAP84074 193 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 KCTD21Q4G0X4 260 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 GLB1LQ6UWU2 654 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 EPHX4Q8IUS5 362 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 CENPNQ96H22 339 aaPredicted RBP18.62■□□□□ 0.57
CPSF3-201ENST00000238112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.62■□□□□ 0.57
CPSF3-201ENST00000238112 HSFX1Q9UBD0 423 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 GPR45Q9Y5Y3 372 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 A0A087WXM4 84 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 A0A1B0GTL3 188 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 A0A1W2PP18 115 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 LCHNA4D1U4 455 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 B4GALT3O60512 393 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 ECI2O75521 394 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 NDST3O95803 873 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 CHEK2O96017 543 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 CYBBP04839 570 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 GPIP06744 558 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 CDK4P11802 303 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 FCGR1AP12314 374 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 OXTRP30559 389 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 OR1G1P47890 313 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 ESRRGP62508 458 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 MERTKQ12866 999 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 TSNQ15631 228 aaKnown RBP18.62■□□□□ 0.57
CPSF3-201ENST00000238112 CYP51A1Q16850 503 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 FBXO48Q5FWF7 155 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 ZNF598Q86UK7 904 aaKnown RBP18.62■□□□□ 0.57
CPSF3-201ENST00000238112 IFNEQ86WN2 208 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 ADGRG5Q8IZF4 528 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 BBS5Q8N3I7 341 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 DNAJB14Q8TBM8 379 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 TSPEARQ8WU66 669 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 MUC13Q9H3R2 512 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 ALG2Q9H553 416 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 TIMM22Q9Y584 194 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 PCDHA9Q9Y5H5 950 aa18.62■□□□□ 0.57
CPSF3-201ENST00000238112 INPP4BO15327 924 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 BAIAP3O94812 1187 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 GNAO1P09471 354 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 MYF6P23409 242 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 ECT2LQ008S8 904 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 OGFOD2Q6N063 350 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 CMTR2Q8IYT2 770 aaKnown RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 KCTD14Q9BQ13 255 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 SYT17Q9BSW7 474 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 TRIM8Q9BZR9 551 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 TLR8Q9NR97 1041 aaKnown RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 TUBA8Q9NY65 449 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 NCF1BA6NI72 391 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 NCF1CA8MVU1 366 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 NDUFS3O75489 264 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 NCF1P14598 390 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 ACBD5Q5T8D3 534 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 AFTPHQ6ULP2 937 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 EFL1Q7Z2Z2 1120 aaKnown RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 GPR141Q7Z602 305 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 TTC9BQ8N6N2 239 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 ATAD1Q8NBU5 361 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 TRPV3Q8NET8 790 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 TMEM125Q96AQ2 219 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 VPS33AQ96AX1 596 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 NLE1Q9NVX2 485 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 OAZ3Q9UMX2 235 aa18.61■□□□□ 0.57
CPSF3-201ENST00000238112 PRG3Q9Y2Y8 225 aaPredicted RBP18.61■□□□□ 0.57
CPSF3-201ENST00000238112 DLGAP1O14490 977 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 GIPC1O14908 333 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 SOAT2O75908 522 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 RPS17P08708 135 aaKnown RBP18.6■□□□□ 0.57
CPSF3-201ENST00000238112 CCT8P50990 548 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 YBX1P67809 324 aaKnown RBP18.6■□□□□ 0.57
CPSF3-201ENST00000238112 RCAN2Q14206 197 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 ATP6AP1Q15904 470 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 TMTC4Q5T4D3 741 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 C17orf99Q6UX52 265 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 ZNF599Q96NL3 588 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 NUSAP1Q9BXS6 441 aaKnown RBP18.6■□□□□ 0.57
CPSF3-201ENST00000238112 SLC52A3Q9NQ40 469 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 C8orf4Q9NR00 106 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 AIG1Q9NVV5 245 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 PTBP2Q9UKA9 531 aaKnown RBP18.6■□□□□ 0.57
CPSF3-201ENST00000238112 NPEPPSL1A6NEC2 478 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 CCDC154A6NI56 674 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 CDC7O00311 574 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 BTN3A1O00481 513 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 MTHFD1P11586 935 aaKnown RBP18.6■□□□□ 0.57
CPSF3-201ENST00000238112 RPL10P27635 214 aaKnown RBP18.6■□□□□ 0.57
CPSF3-201ENST00000238112 MAGEA11P43364 429 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 GSK3BP49841 420 aa18.6■□□□□ 0.57
CPSF3-201ENST00000238112 NAA20P61599 178 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms