RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 METTL18O95568 372 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 APC2O95996 2303 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 SLC4A1P02730 911 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 FTH1P19P0C7X4 201 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 PIRTP0C851 137 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CTSEP14091 401 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 GM2AP17900 193 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 COILP38432 576 aaPredicted RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 SRP54P61011 504 aaKnown RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CDK3Q00526 305 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CDH17Q12864 832 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 SEMA5AQ13591 1074 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 ELOCQ15369 112 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 TAF1AQ15573 450 aaPredicted RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CYP1B1Q16678 543 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 KCTD11Q693B1 232 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CCDC137Q6PK04 289 aaKnown RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 PPP1R21Q6ZMI0 780 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 DBX2Q6ZNG2 339 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 HEATR4Q86WZ0 1026 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 FSTL5Q8N475 847 aaPredicted RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 TRAM1L1Q8N609 369 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 DNAAF3Q8N9W5 541 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 PLA2G15Q8NCC3 412 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 OR56A4Q8NGH8 313 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 RHBDD1Q8TEB9 315 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 SCG3Q8WXD2 468 aaKnown RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 FUBP1Q96AE4 644 aaKnown RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 HIC2Q96JB3 615 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 WDR24Q96S15 920 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 RIOK2Q9BVS4 552 aaKnown RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 SPATA16Q9BXB7 569 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 ETNK1Q9HBU6 452 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 EIF2B3Q9NR50 452 aaKnown RBP11.22□□□□□ -0.61
SF3B6-201ENST00000233468 NCKIPSDQ9NZQ3 722 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CD84Q9UIB8 345 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 APPL1Q9UKG1 709 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 CSNK1G3Q9Y6M4 447 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 DGKBQ9Y6T7 804 aa11.22□□□□□ -0.61
SF3B6-201ENST00000233468 GPR89AB7ZAQ6 455 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 CCDC188H7C350 402 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 KIF2AO00139 706 aaPredicted RBP11.21□□□□□ -0.61
SF3B6-201ENST00000233468 CBFA2T3O75081 653 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 PIAS2O75928 621 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 SUN1O94901 812 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 ECEL1O95672 775 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 APRTP07741 180 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 GPR89BP0CG08 455 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 LPOP22079 712 aaPredicted RBP11.21□□□□□ -0.61
SF3B6-201ENST00000233468 RPL22P35268 128 aaKnown RBP11.21□□□□□ -0.61
SF3B6-201ENST00000233468 SPAM1P38567 509 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 HADHAP40939 763 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 CHRNA4P43681 627 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 KCNJ1P48048 391 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 HK3P52790 923 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 BASP1P80723 227 aaKnown RBP11.21□□□□□ -0.61
SF3B6-201ENST00000233468 CDK16Q00536 496 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 PTPRRQ15256 657 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 PRAMEF14Q5SWL7 426 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 FAM182AQ5T1J6 154 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 HENMT1Q5T8I9 393 aaKnown RBP11.21□□□□□ -0.61
SF3B6-201ENST00000233468 PROSER1Q86XN7 944 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 GKN2Q86XP6 184 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 HID1Q8IV36 788 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 GLMNQ92990 594 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 SCAMP4Q969E2 229 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 SMIM14Q96QK8 99 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 GORASP1Q9BQQ3 440 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 RMI1Q9H9A7 625 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 APOBEC3BQ9UH17 382 aaKnown RBP11.21□□□□□ -0.61
SF3B6-201ENST00000233468 MOSPD1Q9UJG1 213 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 DOLKQ9UPQ8 538 aa11.21□□□□□ -0.61
SF3B6-201ENST00000233468 DOCK9Q9BZ29 2069 aa11.21□□□□□ -0.62
SF3B6-201ENST00000233468 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
SF3B6-201ENST00000233468 K7ESM1 405 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 TPP1O14773 563 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 SCAMP1O15126 338 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 ZNF185O15231 689 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 AQP9O43315 295 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 TRIM16O95361 564 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 ASMTLO95671 621 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 KRT14P02533 472 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 BPIP17213 487 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 DGKAP23743 735 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 IL9RQ01113 521 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 EIF2B5Q13144 721 aaKnown RBP11.2□□□□□ -0.62
SF3B6-201ENST00000233468 SPARCL1Q14515 664 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 PPP1R7Q15435 360 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 LVRNQ6Q4G3 990 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 SYDE1Q6ZW31 735 aaPredicted RBP11.2□□□□□ -0.62
SF3B6-201ENST00000233468 NLRP9Q7RTR0 991 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 RD3Q7Z3Z2 195 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 PHYKPLQ8IUZ5 450 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 TTC30BQ8N4P2 665 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 TAB3Q8N5C8 712 aaPredicted RBP11.2□□□□□ -0.62
SF3B6-201ENST00000233468 MDM1Q8TC05 714 aa11.2□□□□□ -0.62
SF3B6-201ENST00000233468 LMX1AQ8TE12 382 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms