RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
MSH2-201ENST00000233146 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
MSH2-201ENST00000233146 EFCAB9A8MZ26 197 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 MEIS2O14770 477 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 KCNN4O15554 427 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 FGF18O76093 207 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 OR5F1O95221 314 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 IL1R1P14778 569 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 ETV6P41212 452 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 SLC15A1P46059 708 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 ATP5OP48047 213 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 RFX2P48378 723 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 S100A12P80511 92 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 TEKQ02763 1124 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 LAPTM5Q13571 262 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 CLCA4Q14CN2 919 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 AOC3Q16853 763 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 PYCR3Q53H96 274 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 ZBTB37Q5TC79 503 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 RBM23Q86U06 439 aaKnown RBP12.96□□□□□ -0.33
MSH2-201ENST00000233146 VANGL1Q8TAA9 524 aaPredicted RBP12.96□□□□□ -0.33
MSH2-201ENST00000233146 SETD6Q8TBK2 473 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.96□□□□□ -0.333e-9■■■■■ 78.5
MSH2-201ENST00000233146 LTB4R2Q9NPC1 389 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.33
MSH2-201ENST00000233146 CLDN24A6NM45 220 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 USP17L10C9JJH3 530 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 UGT2B17O75795 530 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 MAP2K4P45985 399 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 UGT2B15P54855 530 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 RBM20Q5T481 1227 aaKnown RBP12.96□□□□□ -0.33
MSH2-201ENST00000233146 HDDC2Q7Z4H3 204 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 KCTD6Q8NC69 237 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 MSANTD3Q96H12 275 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 HDHD5Q9BXW7 423 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 RSPH9Q9H1X1 276 aaPredicted RBP12.96□□□□□ -0.33
MSH2-201ENST00000233146 PPA2Q9H2U2 334 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 ENTPD7Q9NQZ7 604 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 KCNH4Q9UQ05 1017 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 PCDHGB2Q9Y5G2 931 aa12.96□□□□□ -0.33
MSH2-201ENST00000233146 ZNF98A6NK75 572 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 UPK1AO00322 258 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 INPP4BO15327 924 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 RNGTTO60942 597 aaKnown RBP12.96□□□□□ -0.34
MSH2-201ENST00000233146 OR2B3O76000 313 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 TP53P04637 393 aaPredicted RBP12.96□□□□□ -0.34
MSH2-201ENST00000233146 CYP2C8P10632 490 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 UMPSP11172 480 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 TCF3P15923 654 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 ATF3P18847 181 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 SLC12A2P55011 1212 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 ISL1P61371 349 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 CD83Q01151 205 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 PRPSAP1Q14558 356 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 AAK1Q2M2I8 961 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 FAM35AQ86V20 835 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 ZNF566Q969W8 418 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 LRCH3Q96II8 777 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 RDH12Q96NR8 316 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 FEM1AQ9BSK4 669 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 WACQ9BTA9 647 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 BEX2Q9BXY8 128 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 NIPAL2Q9H841 368 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 TRMT13Q9NUP7 481 aaKnown RBP12.96□□□□□ -0.34
MSH2-201ENST00000233146 WRAP73Q9P2S5 460 aaPredicted RBP12.96□□□□□ -0.34
MSH2-201ENST00000233146 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 KLF2Q9Y5W3 355 aaPredicted RBP12.96□□□□□ -0.34
MSH2-201ENST00000233146 CSNK1G3Q9Y6M4 447 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 COL4A1P02462 1669 aa12.96□□□□□ -0.34
MSH2-201ENST00000233146 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TMEM233B4DJY2 109 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 PPM1BO75688 479 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 FTH1P02794 183 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ITGB3P05106 788 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 HMGCLP35914 325 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 NAGLUP54802 743 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 IRF9Q00978 393 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 IKZF1Q13422 519 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
MSH2-201ENST00000233146 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
MSH2-201ENST00000233146 ZYG11AQ6WRX3 759 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 FANK1Q8TC84 345 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TMCO6Q96DC7 493 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 APOL4Q9BPW4 351 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 HOPXQ9BPY8 73 aaPredicted RBP12.95□□□□□ -0.34
MSH2-201ENST00000233146 IER2Q9BTL4 223 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 CDADC1Q9BWV3 514 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ATP6AP2A0A1C7CYW4 349 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 ADORA3P0DMS8 318 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TPSB2P20231 275 aa12.95□□□□□ -0.34
MSH2-201ENST00000233146 TGFBR2P37173 567 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms