RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 LRP6O75581 1613 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 TAF4O00268 1085 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 SLC7A1P30825 629 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 GPC2Q8N158 579 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 TMEM132CQ8N3T6 1108 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 FAM126AQ9BYI3 521 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 TRPC4Q9UBN4 977 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 MATN3O15232 486 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 MED26O95402 600 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 MLYCDO95822 493 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 THRBP10828 461 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 ARSAP15289 507 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 CYP3A5P20815 502 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 GLUD2P49448 558 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 RHDQ02161 417 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 PIGFQ07326 219 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 TRIP4Q15650 581 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 DUSP28Q4G0W2 176 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 TIGD5Q53EQ6 642 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 GATA6Q92908 595 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 CCDC162PA2VCL2 907 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 HNRNPCL2B2RXH8 293 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 AURKAO14965 403 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 LZTS3O60299 673 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 NIPSNAP2O75323 286 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 CYP7B1O75881 506 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 DIRAS1O95057 198 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 LPOP22079 712 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 PRDX6P30041 224 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 DGKKQ5KSL6 1271 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 AHSA2Q719I0 299 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 AHI1Q8N157 1196 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 ACVR1CQ8NER5 493 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 C12orf43Q96C57 262 aaKnown RBP13.68□□□□□ -0.22
NFKB1-201ENST00000226574 ATG10Q9H0Y0 220 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 IPPKQ9H8X2 491 aa13.68□□□□□ -0.22
NFKB1-201ENST00000226574 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 hCG_2039718K7EN88 272 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 RFXANKO14593 260 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TYMPP19971 482 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 ITPKAP23677 461 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 GRK3P35626 688 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 DGKEP52429 567 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 PRKCQQ04759 706 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TARBP2Q15633 366 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 EGFL6Q8IUX8 553 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 CEP97Q8IW35 865 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 GRIN3AQ8TCU5 1115 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 PARP4Q9UKK3 1724 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 PKMP14618 531 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 PBX3P40426 434 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 PLD1Q13393 1074 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 ACAP2Q15057 778 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 FAM174BQ3ZCQ3 159 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 CHSY3Q70JA7 882 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 NANOGNBQ7Z5D8 188 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 THAP5Q7Z6K1 395 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 UBE2J2Q8N2K1 259 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 NSUN5Q96P11 429 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 GMLQ99445 158 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TMCC3Q9ULS5 477 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 CDC14AQ9UNH5 594 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 COQ6Q9Y2Z9 468 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 TRPV2Q9Y5S1 764 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 POU2F1P14859 743 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 IL7RP16871 459 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 SOX6P35712 828 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 GPR180Q86V85 440 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 SLC45A3Q96JT2 553 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 GPR22Q99680 433 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 GPATCH1Q9BRR8 931 aaKnown RBP13.67□□□□□ -0.22
NFKB1-201ENST00000226574 ACAT2Q9BWD1 397 aa13.67□□□□□ -0.22
NFKB1-201ENST00000226574 PDZK1P1A8MUH7 402 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 VPS4BO75351 444 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 BCAS2O75934 225 aaPredicted RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 DHRS4L1P0CG22 281 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 CCNCP24863 283 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 LCP2Q13094 533 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 TNFAIP8L3Q5GJ75 292 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 SETD9Q8NE22 299 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 MCFD2Q8NI22 146 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 ZC4H2Q9NQZ6 224 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms