RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 MROH6A6NGR9 719 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 IRAK2O43187 625 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 RSL1D1O76021 490 aaKnown RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 FGF4P08620 206 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 OCM2P0CE71 109 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 OCMP0CE72 109 aaPredicted RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 EEF1B2P24534 225 aaKnown RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 IL12AP29459 219 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 CCR1P32246 355 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 NFKB2Q00653 900 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 RPS6KA2Q15349 733 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 SIRPB2Q5JXA9 342 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 GALNT18Q6P9A2 607 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 ANKRD13AQ8IZ07 590 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 HASPINQ8TF76 798 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 TSPAN17Q96FV3 270 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 IMP4Q96G21 291 aaKnown RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 RNF145Q96MT1 663 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 CHID1Q9BWS9 393 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 TRIM15Q9C019 465 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 LHPPQ9H008 270 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 ARNT2Q9HBZ2 717 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 CSNK1G1Q9HCP0 422 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 CD320Q9NPF0 282 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 ZNF225Q9UK10 706 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 HS3ST4Q9Y661 456 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 SMIM35A0A1B0GVV1 85 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 UPK1AO00322 258 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 ENPP3O14638 875 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 LDB2O43679 373 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 SYNCRIPO60506 623 aaKnown RBP12.34□□□□□ -0.43
NUP88-201ENST00000225696 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 COQ9O75208 318 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 CNTN5O94779 1100 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
NUP88-201ENST00000225696 MATN4O95460 622 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 C1RP00736 705 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 GPIP06744 558 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 IL7RP16871 459 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 LBPP18428 481 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 HOXC13P31276 330 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
NUP88-201ENST00000225696 AGTR2P50052 363 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 HLCSP50747 726 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 IST1P53990 364 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
NUP88-201ENST00000225696 SELPLGQ14242 412 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 TIGD2Q4W5G0 525 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 AFMIDQ63HM1 303 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 PRMT9Q6P2P2 845 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 DDHD1Q8NEL9 900 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 OR2T11Q8NH01 316 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 CALML6Q8TD86 181 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 NANOGQ9H9S0 305 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 ANAPC2Q9UJX6 822 aa12.34□□□□□ -0.43
NUP88-201ENST00000225696 A0A1W2PP18 115 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 NCF1BA6NI72 391 aaPredicted RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 RRN3P2A6NIE6 340 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 NCF1CA8MVU1 366 aaPredicted RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 E9PAM4 449 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 CPNE6O95741 557 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 NCF1P14598 390 aaPredicted RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 ZNF37AP17032 561 aaPredicted RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 FDXRP22570 491 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 EEF1DP29692 281 aaKnown RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 LHX1P48742 406 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 PLIN5Q00G26 463 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 HABP4Q5JVS0 413 aaKnown RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 CCNYL2Q5T2Q4 361 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 PTRH1Q86Y79 214 aaKnown RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 PGBD5Q8N414 524 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 PDPRQ8NCN5 879 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 HMCESQ96FZ2 354 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 SLC25A51Q9H1U9 297 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 GID8Q9NWU2 228 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 ZNF639Q9UID6 485 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 ASB1Q9Y576 335 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 PCDHGA11Q9Y5H2 935 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 C1orf232A0A0U1RR37 186 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 SLC7A4O43246 635 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 SNAP91O60641 907 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 SULT1C4O75897 302 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 GOT2P00505 430 aaKnown RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 LDLRP01130 860 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 CCNA2P20248 432 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 MAP4P27816 1152 aaKnown RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 BCAP31P51572 246 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 ZNF135P52742 658 aaPredicted RBP12.33□□□□□ -0.44
NUP88-201ENST00000225696 ADAM17P78536 824 aa12.33□□□□□ -0.44
NUP88-201ENST00000225696 CLCQ05315 142 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms