RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 UXTQ9UBK9 157 aaPredicted RBP24.82■■□□□ 1.56
RUNDC3A-201ENST00000225441 INSL5Q9Y5Q6 135 aa24.82■■□□□ 1.56
RUNDC3A-201ENST00000225441 ARHGAP10A1A4S6 786 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 DYTNA2CJ06 578 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 RPP40O75818 363 aaKnown RBP24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 NR1H2P55055 460 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 SERINC3Q13530 473 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 GPR158Q5T848 1215 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 SATL1Q86VE3 508 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 PACRGLQ8N7B6 248 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 MRPL43Q8N983 215 aaKnown RBP24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 BRSK1Q8TDC3 778 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 PABPC5Q96DU9 382 aaKnown RBP24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 GDF15Q99988 308 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 HAUS8Q9BT25 410 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 TNFRSF12AQ9NP84 129 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 C8orf4Q9NR00 106 aa24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 INTS10Q9NVR2 710 aaKnown RBP24.81■■□□□ 1.56
RUNDC3A-201ENST00000225441 GBF1Q92538 1859 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 UBFD1O14562 309 aaKnown RBP24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 TGM5O43548 720 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 RAMP2O60895 175 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 MATN4O95460 622 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 ZDHHC11BP0C7U3 371 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 PSMC3P17980 439 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 GPX3P22352 226 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 MSX2P35548 267 aaPredicted RBP24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 KPNA1P52294 538 aaPredicted RBP24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 MYBPC1Q00872 1141 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 RING1Q06587 406 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 FOXM1Q08050 763 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 GRIK2Q13002 908 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 POLD3Q15054 466 aaPredicted RBP24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 ALG1LQ6GMV1 187 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 LILRA6Q6PI73 481 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 TMEM207Q6UWW9 146 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 ANKFN1Q8N957 763 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 SYTL2Q9HCH5 934 aa24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
RUNDC3A-201ENST00000225441 AQP12BA6NM10 295 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 HIDE1A8MVS5 230 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 GRM6O15303 877 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 CD3EAPO15446 510 aaKnown RBP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 CSPG5O95196 566 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 ARSDP51689 593 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 TWF1Q12792 350 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 BNIP2Q12982 314 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 VEPH1Q14D04 833 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 MAP7D1Q3KQU3 841 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 EFL1Q7Z2Z2 1120 aaKnown RBP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 DHFR2Q86XF0 187 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 CHERPQ8IWX8 916 aaKnown RBP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 AQP12AQ8IXF9 295 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 MINDY1Q8N5J2 469 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 PSMG2Q969U7 264 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 ATP6V1E2Q96A05 226 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 CNBD2Q96M20 576 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 GPATCH1Q9BRR8 931 aaKnown RBP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 MUC13Q9H3R2 512 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 TMEM45AQ9NWC5 275 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 ABCD2Q9UBJ2 740 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 DMTF1Q9Y222 760 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 FIS1Q9Y3D6 152 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 PRORSD1PA6NEY8 169 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 PRAMEF11O60813 436 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 IGLV3-27P01718 113 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 SPATA31D3P0C874 917 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 BMP2P12643 396 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 HMGA1P17096 107 aaKnown RBP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 ERVK-21P61565 698 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 ALFQ53S48 1182 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 CYHR1Q6ZMK1 362 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 SPATA31D4Q6ZUB0 917 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 TFAP2DQ7Z6R9 452 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 NUDT5Q9UKK9 219 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 TMCO1Q9UM00 188 aa24.79■■□□□ 1.56
RUNDC3A-201ENST00000225441 AZIN1O14977 448 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 PLK1P53350 603 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 MAXP61244 160 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 PPP1R3AQ16821 1122 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 SLC5A9Q2M3M2 681 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 TYSND1Q2T9J0 566 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 KANK2Q63ZY3 851 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 FBXL22Q6P050 247 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 BBS5Q8N3I7 341 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 PDZD8Q8NEN9 1154 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 OR2T34Q8NGX1 318 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 OR2T3Q8NH03 318 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 OVCA2Q8WZ82 227 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 MYRFLQ96LU7 910 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 TCF12Q99081 682 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 GID8Q9NWU2 228 aa24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 MARCH4Q9P2E8 410 aaPredicted RBP24.78■■□□□ 1.56
RUNDC3A-201ENST00000225441 HSD17B1P14061 328 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 TCN1P20061 433 aaPredicted RBP24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 PSMA3P25788 255 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 PBX2P40425 430 aa24.77■■□□□ 1.56
RUNDC3A-201ENST00000225441 EPHB3P54753 998 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms