RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 DDI1Q8WTU0 396 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 VWCEQ96DN2 955 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 DTNBP1Q96EV8 351 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 HERC2P3Q9BVR0 1158 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 ERVK-6Q9BXR3 956 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 MRASO14807 208 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 NRP2O60462 931 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 SUPT7LO94864 414 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF37AP17032 561 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 SLC7A1P30825 629 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 CORO1AP31146 461 aaKnown RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 PPP3CCP48454 512 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF140P52738 457 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 TXNL4AP83876 142 aaKnown RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF177Q13360 481 aaPredicted RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 IYDQ6PHW0 289 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 AFTPHQ6ULP2 937 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 SLC39A11Q8N1S5 342 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 PTERQ96BW5 349 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF558Q96NG5 402 aa22.1■■□□□ 1.13
CCDC9-201ENST00000221922 PRPF18Q99633 342 aaKnown RBP22.1■■□□□ 1.13
CCDC9-201ENST00000221922 C7orf72A4D263 438 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 PIRTP0C851 137 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 KCNC1P48547 511 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 SEMA3AQ14563 771 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 PTPRCAPQ14761 206 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 TAF1AQ15573 450 aaPredicted RBP22.09■■□□□ 1.13
CCDC9-201ENST00000221922 SAMD4BQ5PRF9 694 aaKnown RBP22.09■■□□□ 1.13
CCDC9-201ENST00000221922 C6orf10Q5SRN2 563 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 BORAQ6PGQ7 559 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 LRTOMTQ8WZ04 291 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 ZNF689Q96CS4 500 aaPredicted RBP22.09■■□□□ 1.13
CCDC9-201ENST00000221922 COQ10BQ9H8M1 238 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 SYTL2Q9HCH5 934 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 SCUBE2Q9NQ36 999 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 CROTQ9UKG9 612 aa22.09■■□□□ 1.13
CCDC9-201ENST00000221922 A0A1B0GVG6 124 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 A0A1B0GVM2 712 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 RFC2P35250 354 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 RALGDSQ12967 914 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 VEPH1Q14D04 833 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 ADRM1Q16186 407 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 UGT3A2Q3SY77 523 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.08■■□□□ 1.13
CCDC9-201ENST00000221922 ADGRF1Q5T601 910 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 B3GNT6Q6ZMB0 384 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 ALDH16A1Q8IZ83 802 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 RMDN1Q96DB5 314 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 TMEM169Q96HH4 297 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 TCF12Q99081 682 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 KLF16Q9BXK1 252 aaPredicted RBP22.08■■□□□ 1.13
CCDC9-201ENST00000221922 GRIP2Q9C0E4 1043 aa22.08■■□□□ 1.13
CCDC9-201ENST00000221922 TFB2MQ9H5Q4 396 aaKnown RBP22.08■■□□□ 1.13
CCDC9-201ENST00000221922 ANAPC1Q9H1A4 1944 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 PSMC3P17980 439 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 CR2P20023 1033 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 SCNN1BP51168 640 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 NR1H2P55055 460 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 TIAL1Q01085 375 aaKnown RBP eCLIP22.08■■□□□ 1.12
CCDC9-201ENST00000221922 PLD1Q13393 1074 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 RAB33AQ14088 237 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 TAF12Q16514 161 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 MYLK3Q32MK0 819 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 UNC50Q53HI1 259 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 SPOUT1Q5T280 376 aaKnown RBP22.08■■□□□ 1.12
CCDC9-201ENST00000221922 ISLR2Q6UXK2 745 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 GLT6D1Q7Z4J2 308 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 ZFP28Q8NHY6 868 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 OSBPL11Q9BXB4 747 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 CCDC68Q9H2F9 335 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 DMTF1Q9Y222 760 aa22.08■■□□□ 1.12
CCDC9-201ENST00000221922 C2orf81A6NN90 581 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 SRP72O76094 671 aaKnown RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 SPATA31D3P0C874 917 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 ATP6V1B1P15313 513 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 PSMA3P25788 255 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 CLEC6AQ6EIG7 209 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 SPATA31D4Q6ZUB0 917 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 HERC6Q8IVU3 1022 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 ROPN1LQ96C74 230 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 MPP4Q96JB8 637 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 TDRD1Q9BXT4 1180 aaKnown RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 RNF38Q9H0F5 515 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 SEMA6AQ9H2E6 1030 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 RC3H2Q9HBD1 1191 aaKnown RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 GKN1Q9NS71 199 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 POLR3BQ9NW08 1133 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 AGO1Q9UL18 857 aaKnown RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 VPS9D1Q9Y2B5 631 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 RNF11Q9Y3C5 154 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 ACTL7AQ9Y615 435 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 RGRP47804 291 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 RPS6KA3P51812 740 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 NRF1Q16656 503 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 FUNDC1Q8IVP5 155 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 RYBPQ8N488 228 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 PTGR2Q8N8N7 351 aaPredicted RBP22.07■■□□□ 1.12
CCDC9-201ENST00000221922 C19orf60Q96EN9 201 aa22.07■■□□□ 1.12
CCDC9-201ENST00000221922 CRISPLD2Q9H0B8 497 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms