RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 BTKQ06187 659 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 ACSBG2Q5FVE4 666 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 NXNQ6DKJ4 435 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 TMEM25Q86YD3 366 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 MRGBPQ9NV56 204 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 TRAF6Q9Y4K3 522 aa29.51■■■□□ 2.31
PABPN1-201ENST00000216727 RGSL1A5PLK6 1076 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 GRM6O15303 877 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 NIPSNAP2O75323 286 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 CTSOP43234 321 aaPredicted RBP29.5■■■□□ 2.31
PABPN1-201ENST00000216727 FUT11Q495W5 492 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 PREPLQ4J6C6 727 aaPredicted RBP29.5■■■□□ 2.31
PABPN1-201ENST00000216727 ICE2Q659A1 982 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 ZNF557Q8N988 423 aaPredicted RBP29.5■■■□□ 2.31
PABPN1-201ENST00000216727 CD200R1Q8TD46 325 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 EXT2Q93063 718 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 VOPP1Q96AW1 172 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 RPL10LQ96L21 214 aaKnown RBP29.5■■■□□ 2.31
PABPN1-201ENST00000216727 TUBGCP5Q96RT8 1024 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 LYSMD1Q96S90 227 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 GALPQ9UBC7 116 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 RNF112Q9ULX5 631 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 PCDHB1Q9Y5F3 818 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 A0A088AWK7 358 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 C1orf232A0A0U1RR37 186 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 SYCE1LA8MT33 242 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 TSPAN12O95859 305 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 HNF1BP35680 557 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 PFKFB4Q16877 469 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 RP9Q8TA86 221 aaKnown RBP29.5■■■□□ 2.31
PABPN1-201ENST00000216727 SLC7A8Q9UHI5 535 aa29.5■■■□□ 2.31
PABPN1-201ENST00000216727 GAPDHSO14556 408 aaPredicted RBP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 PRMT5O14744 637 aaPredicted RBP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 HNRNPA1P09651 372 aaKnown RBP eCLIP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 STK19P49842 368 aaPredicted RBP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 HERC3Q15034 1050 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 TRMT5Q32P41 509 aaKnown RBP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 UGT3A1Q6NUS8 523 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 MICAL1Q8TDZ2 1067 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 SLC30A3Q99726 388 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 CEP44Q9C0F1 390 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 APPL1Q9UKG1 709 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 CIB2O75838 187 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 SLC5A9Q2M3M2 681 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 MYLK3Q32MK0 819 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 TMEM198Q66K66 360 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 C22orf39Q6P5X5 142 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 PELI3Q8N2H9 469 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 SIDT2Q8NBJ9 832 aaKnown RBP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 IRF7Q92985 503 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 FUBP1Q96AE4 644 aaKnown RBP29.49■■■□□ 2.31
PABPN1-201ENST00000216727 IKZF3Q9UKT9 509 aa29.49■■■□□ 2.31
PABPN1-201ENST00000216727 LINC01553A4QN01 128 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 C5orf67F2Z3F1 127 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 PRAMEF1O95521 474 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 ANP32DO95626 131 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 GFAPP14136 432 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 IL2P60568 153 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 NAA20P61599 178 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 TSNQ15631 228 aaKnown RBP29.48■■■□□ 2.31
PABPN1-201ENST00000216727 C6orf163Q5TEZ5 329 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 CHSY3Q70JA7 882 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 SNX20Q7Z614 316 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 CBARPQ8N350 705 aaPredicted RBP29.48■■■□□ 2.31
PABPN1-201ENST00000216727 PAF1Q8N7H5 531 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 GIMAP7Q8NHV1 300 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 ECHDC3Q96DC8 303 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 CLPTM1LQ96KA5 538 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 CATSPER2Q96P56 530 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 ZBTB26Q9HCK0 441 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 TBC1D14Q9P2M4 693 aa29.48■■■□□ 2.31
PABPN1-201ENST00000216727 GOLGA8CPA6NN73 597 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 SKAP2O75563 359 aaPredicted RBP29.47■■■□□ 2.31
PABPN1-201ENST00000216727 FGF4P08620 206 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 CHRM3P20309 590 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 ITGAXP20702 1163 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 RPS3P23396 243 aaKnown RBP eCLIP29.47■■■□□ 2.31
PABPN1-201ENST00000216727 LBX1P52954 281 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 C1QTNF8P60827 252 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 ASTLQ6HA08 431 aaPredicted RBP29.47■■■□□ 2.31
PABPN1-201ENST00000216727 C17orf80Q9BSJ5 609 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 BBS2Q9BXC9 721 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 CPEB1Q9BZB8 566 aaKnown RBP29.47■■■□□ 2.31
PABPN1-201ENST00000216727 SLC25A13Q9UJS0 675 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 PPIL1Q9Y3C6 166 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 E5RI56 91 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 NEDD8-MDP1E9PL57 170 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 KLK8O60259 260 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 XYLBO75191 536 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 ECI2O75521 394 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 GNAZP19086 355 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 CCNG1P51959 295 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 CUL3Q13618 768 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 ZNF77Q15935 545 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 FAM151BQ6UXP7 276 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 ZSWIM9Q86XI8 627 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 CLYBLQ8N0X4 340 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 FBXO39Q8N4B4 442 aa29.47■■■□□ 2.31
PABPN1-201ENST00000216727 PCDH20Q8N6Y1 951 aaKnown RBP29.47■■■□□ 2.31
PABPN1-201ENST00000216727 TTC1Q99614 292 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms