RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 KIAA0930Q6ICG6 404 aaPredicted RBP20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 MACC1Q6ZN28 852 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 TMEM135Q86UB9 458 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 ZBED8Q8IZ13 594 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 GLYATL1Q969I3 302 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 HDAC10Q969S8 669 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 MFSD3Q96ES6 412 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 ZNF778Q96MU6 729 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 AGAP2Q99490 1192 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 ZCCHC2Q9C0B9 1178 aaKnown RBP20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 SLC2A6Q9UGQ3 507 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 ZC3H7BQ9UGR2 993 aaKnown RBP20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 CHMP2BQ9UQN3 213 aa20.05■□□□□ 0.8
RHBDD3-201ENST00000216085 GPR179Q6PRD1 2367 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 FADS2P1A8MWK0 482 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 INPP4BO15327 924 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 FOXD2O60548 495 aaPredicted RBP20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 SLC25A14O95258 325 aaPredicted RBP20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 SOD1P00441 154 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 NMBRP28336 390 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 PPARGP37231 505 aaPredicted RBP20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 ELK3P41970 407 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 MSS51Q4VC12 460 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 ATP13A5Q4VNC0 1218 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 AARS2Q5JTZ9 985 aaKnown RBP20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 LDLRAP1Q5SW96 308 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 OXR1Q8N573 874 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 PYROXD1Q8WU10 500 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 BTN2A2Q8WVV5 523 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 FUBP1Q96AE4 644 aaKnown RBP20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 WDR92Q96MX6 357 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 PWWP2AQ96N64 755 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 SAYSD1Q9NPB0 183 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 ZDHHC18Q9NUE0 388 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 ANKRD6Q9Y2G4 727 aa20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 ZNF106Q9H2Y7 1883 aaKnown RBP20.04■□□□□ 0.8
RHBDD3-201ENST00000216085 MYO15AQ9UKN7 3530 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 A0A1B0GVT2 93 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CCL22O00626 93 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 WNT1P04628 370 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 NXPH1P58417 271 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 XIAPP98170 497 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CBLBQ13191 982 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 PEX6Q13608 980 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 ANKRD20A4Q4UJ75 823 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 FASTKD1Q53R41 847 aaKnown RBP20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 SPANXN3Q5MJ09 141 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 PLA2G2CQ5R387 149 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 LAYNQ6UX15 382 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 PARGQ86W56 976 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 OTUD6BQ8N6M0 293 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 FBXO36Q8NEA4 188 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 OR4L1Q8NH43 312 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 SGSM3Q96HU1 749 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 TTC25Q96NG3 672 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 TEX264Q9Y6I9 313 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CCDC162PA2VCL2 907 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 PFDN6O15212 129 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 BANF1O75531 89 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 GOT2P00505 430 aaKnown RBP20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 ARSDP51689 593 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 ATXN3P54252 364 aaPredicted RBP20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CES3Q6UWW8 571 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 TAS2R42Q7RTR8 314 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 PELI3Q8N2H9 469 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 HEXDCQ8WVB3 486 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CFAP36Q96G28 342 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 SUDS3Q9H7L9 328 aaPredicted RBP20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CAPN10Q9HC96 672 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 GPR27Q9NS67 375 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 CATSPERZQ9NTU4 200 aa20.03■□□□□ 0.8
RHBDD3-201ENST00000216085 DMDP11532 3685 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 SPTY2D1-AS1A0A0U1RR47 76 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 CFAP99D6REC4 459 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 GAPDHSO14556 408 aaPredicted RBP20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 VAPBO95292 243 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 ASMTLO95671 621 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 ZNF806P0C7X5 589 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 RALBP11234 206 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 MCM3P25205 808 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 CARSP49589 748 aaKnown RBP20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 BLKP51451 505 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 THOC5Q13769 683 aaKnown RBP20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 GTF2H3Q13889 308 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 CRYMQ14894 314 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 LONRF1Q17RB8 773 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 LYPLAL1Q5VWZ2 237 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 MRNIPQ6NTE8 343 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 CERS6Q6ZMG9 384 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 ANKMY2Q8IV38 441 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 PALM2Q8IXS6 379 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 SLC22A18ASQ8N1D0 253 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 AGGF1Q8N302 714 aaeCLIP20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 EIF1ADQ8N9N8 165 aaKnown RBP20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 OR56A4Q8NGH8 313 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 COX14Q96I36 57 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 KLQ9UEF7 1012 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 CACNA1EQ15878 2313 aa20.02■□□□□ 0.8
RHBDD3-201ENST00000216085 GPR89AB7ZAQ6 455 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms