RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 T-ENOLP0DO92 83 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 HLA-EP13747 358 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 NFATC2Q13469 925 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ADGRE1Q14246 886 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 FAM83EQ2M2I3 478 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 FNDC3BQ53EP0 1204 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TAS2R42Q7RTR8 314 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SMRP1Q8NCR6 262 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PPP1R14CQ8TAE6 165 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZNF398Q8TD17 642 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 FAM136AQ96C01 138 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SCYL1Q96KG9 808 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 DCTN4Q9UJW0 460 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PLXNA2O75051 1894 aa19.57■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GLYATL1P3A0A0U1RQE8 302 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TBC1D3BA6NDS4 549 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CHUKO15111 745 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 LTA4HP09960 611 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZNF37AP17032 561 aaPredicted RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CA5AP35218 305 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SPAM1P38567 509 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 STX3Q13277 289 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 RIPK1Q13546 671 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ITGA9Q13797 1035 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZNF234Q14588 700 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 COL19A1Q14993 1142 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 HNRNPA1L2Q32P51 320 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZNF805Q5CZA5 627 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SNX20Q7Z614 316 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GPR26Q8NDV2 337 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 OR6Y1Q8NGX8 325 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 RDH11Q8TC12 318 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CCDC68Q9H2F9 335 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ASB8Q9H765 288 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KCNK13Q9HB14 408 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MID2Q9UJV3 735 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MYO10Q9HD67 2058 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CKAP5Q14008 2032 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ECI2O75521 394 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TROVE2P10155 538 aaKnown RBP eCLIP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 RALBP11234 206 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SLC26A3P40879 764 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ADARP55265 1226 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 AGAP9Q5VTM2 703 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PBXIP1Q96AQ6 731 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TRMT61BQ9BVS5 477 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MRPL46Q9H2W6 279 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 POPDC3Q9HBV1 291 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 THAP1Q9NVV9 213 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 OXSMQ9NWU1 459 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 FAM50BQ9Y247 325 aa19.56■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ANTXRLA6NF34 631 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SERPINE1P05121 402 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MYL2P10916 166 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TARSP26639 723 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 EIF2DP41214 584 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PTGER3P43115 390 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 POM121L1PQ3SYA9 428 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SETMARQ53H47 684 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CTSL3PQ5NE16 218 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ZYG11AQ6WRX3 759 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CERS6Q6ZMG9 384 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 MRPL57Q9BQC6 102 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TMEM245Q9H330 911 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TXLNGQ9NUQ3 528 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TAS2R13Q9NYV9 303 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 DKK3Q9UBP4 350 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 BAIAP2L1Q9UHR4 511 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SARDHQ9UL12 918 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TRBV5-4A0A0C4DH59 114 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UPK3BL1B0FP48 263 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UPK3BL2E5RIL1 263 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KAT7O95251 611 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TGDSO95455 350 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PKMP14618 531 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ITGALP20701 1170 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 KPNA2P52292 529 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TECRLQ5HYJ1 363 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 C9orf64Q5T6V5 341 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SERPINA13PQ6UXR4 307 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 SERPINA9Q86WD7 417 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 STK40Q8N2I9 435 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 UTP4Q969X6 686 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CCDC97Q96F63 343 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TRIM55Q9BYV6 548 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 HAO1Q9UJM8 370 aa19.55■□□□□ 0.72
TNFRSF1A-201ENST00000162749 EDDM13A0A1B0GTR0 161 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ITM2AO43736 263 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 RHOBTB1O94844 696 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 C1SP09871 688 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 TIMP2P16035 220 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 GRK2P25098 689 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ARRB2P32121 409 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 PDAP1Q13442 181 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 CHRNA6Q15825 494 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ITPRIPL2Q3MIP1 535 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 NAPRTQ6XQN6 538 aa19.54■□□□□ 0.72
TNFRSF1A-201ENST00000162749 ATG14Q6ZNE5 492 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms