RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 GPR63Q9BZJ6 419 aa24.73■■□□□ 1.55
TSR3-201ENST00000007390 LRRN3Q9H3W5 708 aa24.73■■□□□ 1.55
TSR3-201ENST00000007390 SYNDIG1Q9H7V2 258 aa24.73■■□□□ 1.55
TSR3-201ENST00000007390 LRIT1Q9P2V4 623 aa24.73■■□□□ 1.55
TSR3-201ENST00000007390 SPO11Q9Y5K1 396 aa24.73■■□□□ 1.55
TSR3-201ENST00000007390 ARHGEF17Q96PE2 2063 aaPredicted RBP24.73■■□□□ 1.55
TSR3-201ENST00000007390 H7C0C1 242 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 EIF2S3P41091 472 aaKnown RBP24.72■■□□□ 1.55
TSR3-201ENST00000007390 CETN2P41208 172 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 ATP5OP48047 213 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 MARK2Q7KZI7 788 aaKnown RBP24.72■■□□□ 1.55
TSR3-201ENST00000007390 ZNF438Q7Z4V0 828 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 SPRED1Q7Z699 444 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 SYCE1Q8N0S2 351 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 ZNF578Q96N58 590 aaPredicted RBP24.72■■□□□ 1.55
TSR3-201ENST00000007390 DESI2Q9BSY9 194 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 ZSCAN5AQ9BUG6 496 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 RMI1Q9H9A7 625 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 PCDHGA8Q9Y5G5 932 aa24.72■■□□□ 1.55
TSR3-201ENST00000007390 A0A1W2PNU3 283 aaPredicted RBP24.71■■□□□ 1.55
TSR3-201ENST00000007390 TMX2-CTNND1H3BSU7 103 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 DNAJC6O75061 913 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 ASMTLO95671 621 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 ATP1A1P05023 1023 aaKnown RBP24.71■■□□□ 1.55
TSR3-201ENST00000007390 PYGMP11217 842 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 RBL1P28749 1068 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 ACTR1BP42025 376 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 ACTR1AP61163 376 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 OTUD4Q01804 1114 aaKnown RBP24.71■■□□□ 1.55
TSR3-201ENST00000007390 MPP3Q13368 585 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 NR1D2Q14995 579 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 ZNF569Q5MCW4 686 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 CDKL3Q8IVW4 592 aaPredicted RBP24.71■■□□□ 1.55
TSR3-201ENST00000007390 TRAM1L1Q8N609 369 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 LIN37Q96GY3 246 aaPredicted RBP24.71■■□□□ 1.55
TSR3-201ENST00000007390 MRGPRX2Q96LB1 330 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 FERMT1Q9BQL6 677 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 GBA3Q9H227 469 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 TRABDQ9H4I3 376 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 AMFRQ9UKV5 643 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 LHX6Q9UPM6 363 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 SATB2Q9UPW6 733 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 PLEKHM1Q9Y4G2 1056 aa24.71■■□□□ 1.55
TSR3-201ENST00000007390 MACROD2A1Z1Q3 448 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 GOLGA6L6A8MZA4 724 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 MIF4GDA9UHW6 222 aaKnown RBP24.7■■□□□ 1.54
TSR3-201ENST00000007390 TJP3O95049 919 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 ECEL1O95672 775 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 TNNT3P45378 269 aaPredicted RBP24.7■■□□□ 1.54
TSR3-201ENST00000007390 MAZP56270 477 aaKnown RBP24.7■■□□□ 1.54
TSR3-201ENST00000007390 ERVPABLB-1P60509 514 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 C3orf38Q5JPI3 329 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 SIRPB2Q5JXA9 342 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 PEX26Q7Z412 305 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 NAGSQ8N159 534 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 ARL14Q8N4G2 192 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 WDR36Q8NI36 951 aaKnown RBP24.7■■□□□ 1.54
TSR3-201ENST00000007390 PLEKHG4BQ96PX9 1271 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 SPATA16Q9BXB7 569 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 CARD9Q9H257 536 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 ASCL3Q9NQ33 180 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 TRIM10Q9UDY6 481 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 RSPH14Q9UHP6 348 aa24.7■■□□□ 1.54
TSR3-201ENST00000007390 CCDC187A0A096LP49 1063 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 AURKAO14965 403 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 SLC4A1P02730 911 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 BPIP17213 487 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 HLA-DPA1P20036 260 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 CCKBRP32239 447 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 HMGCLP35914 325 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 MLLT3P42568 568 aaPredicted RBP24.69■■□□□ 1.54
TSR3-201ENST00000007390 ALS2CLQ60I27 953 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 ITPRIPL1Q6GPH6 555 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 C19orf48Q6RUI8 117 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 B3GNT8Q7Z7M8 397 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 Q8N9G6 341 aaPredicted RBP24.69■■□□□ 1.54
TSR3-201ENST00000007390 HNRNPLLQ8WVV9 542 aaKnown RBP24.69■■□□□ 1.54
TSR3-201ENST00000007390 DCBLD2Q96PD2 775 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 C10orf88Q9H8K7 445 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 HACD3Q9P035 362 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 ZNHIT2Q9UHR6 403 aa24.69■■□□□ 1.54
TSR3-201ENST00000007390 PCYT1BQ9Y5K3 369 aaPredicted RBP24.69■■□□□ 1.54
TSR3-201ENST00000007390 A0A0U1RQJ8 604 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 GPR89AB7ZAQ6 455 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 RRP8O43159 456 aaKnown RBP24.68■■□□□ 1.54
TSR3-201ENST00000007390 ZNF189O75820 626 aaPredicted RBP24.68■■□□□ 1.54
TSR3-201ENST00000007390 ANXA9O76027 345 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 GPR89BP0CG08 455 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 RBP3P10745 1247 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 CHRNA4P43681 627 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 EIF3EP60228 445 aaKnown RBP24.68■■□□□ 1.54
TSR3-201ENST00000007390 B4GALNT1Q00973 533 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 EIF3IQ13347 325 aaKnown RBP24.68■■□□□ 1.54
TSR3-201ENST00000007390 SLC1A5Q15758 541 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 COL28A1Q2UY09 1125 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 AADACL2Q6P093 401 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 TTC30BQ8N4P2 665 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 UBL4BQ8N7F7 174 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 IPMKQ8NFU5 416 aa24.68■■□□□ 1.54
TSR3-201ENST00000007390 GLYATL1Q969I3 302 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms