RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 CskP41241 450 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Rps24P62849 133 aaKnown RBP18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Larp7Q05CL8 570 aaKnown RBP18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Defa17Q64016 82 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Slc9a8Q8R4D1 576 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Pcdhac2Q91Y09 1006 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ino80bQ99PT3 375 aaKnown RBP18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 PaicsQ9DCL9 425 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fbxo17Q9QZM8 286 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Chrna6Q9R0W9 494 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fam217bA2AJW5 387 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Anxa6P14824 673 aaKnown RBP18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tbxas1P36423 533 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Serpinb5P70124 375 aaKnown RBP18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Rassf5Q5EBH1 413 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Olfr1418Q7TQS3 318 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Lgals12Q91VD1 314 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tnfaip8Q921Z5 198 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tmem80Q9D3H0 123 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Aqp5Q9WTY4 265 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm10720D3Z1I5 223 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Adh6aE9Q5Z6 375 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm2888K7N746 267 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Epb41l4aP52963 686 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Bcl2a1bQ497M6 172 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Zdhhc20Q5Y5T1 380 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mkrn3Q60764 544 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Cypt2Q6P924 180 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Cd300aQ6SJQ0 318 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Arl5aQ80ZU0 179 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Bdh2Q8JZV9 245 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ccdc80Q8R2G6 949 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Yipf2Q99LP8 312 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 PpigA2AR02 752 aaKnown RBP18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Amd2D3Z6H8 334 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Axin1O35625 863 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Amd1P0DMN7 334 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 CidecP56198 239 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Jak2Q62120 1129 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Dnajb13Q80Y75 316 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Hspbap1Q8BK58 483 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tmem74Q8BQU7 305 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ints11Q9CWS4 600 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Prorsd1Q9D820 169 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 ChmlQ9QZD5 621 aa18.3■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Scn4aQ9ER60 1841 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Slc4a11A2AJN7 862 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Atp5jP97450 108 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Olfr1198Q7TR12 308 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vac14Q80WQ2 782 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tas1r1Q99PG6 842 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Sae1Q9R1T2 350 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm7535F7CXE4 302 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Hcn4O70507 1186 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm8773Q3UQ24 132 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tab3Q571K4 716 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vat1Q62465 406 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Arhgap11aQ80Y19 987 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 ToporsQ80Z37 1033 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Nmd3Q99L48 503 aaKnown RBP18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Cmtm7Q9ESD6 167 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Casz1Q9CWL2 1761 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm14401A2ARV7 303 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ttll11A4Q9F4 727 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Prdx3P20108 257 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 KrtdapQ3V2T4 102 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fgl1Q71KU9 314 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Q8BGA7 448 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Nup54Q8BTS4 510 aaKnown RBP18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Btbd9Q8C726 612 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Pcyox1lQ8C7K6 495 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Lars2Q8VDC0 902 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Dusp26Q9D700 211 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Dgat2Q9DCV3 388 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ropn1Q9ESG2 212 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Atp6v1g2Q9WTT4 118 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Olfr292F8VQ84 308 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Clec2lP0C7M9 211 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Pxylp1Q8BHA9 480 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Svs2Q8BS30 375 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gk5Q8BX05 534 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mcfd2Q8K5B2 145 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Olfr449Q8VGW8 311 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Nphs2Q91X05 385 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fbxl12Q9EPX5 326 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Kdelc1Q9JHP7 502 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 EmcnQ9R0H2 261 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Cry2Q9R194 592 aa18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fads2Q9Z0R9 444 aaKnown RBP18.29■□□□□ 0.52
Scaf11-201ENSMUST00000047835 CrnnD3YUU6 520 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Man2b1O09159 1013 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Per1O35973 1291 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Naa20P61600 178 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Csnk2bP67871 215 aaKnown RBP18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 RogdiQ3TDK6 287 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Usp17laQ61068 526 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fastkd5Q7TMV3 762 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Noc4lQ8BHY2 516 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Casp9Q8C3Q9 454 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mptx1Q8R1M8 219 aa18.28■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms