RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Rab44Q8CB87 725 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Unc5aQ8K1S4 898 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam129bQ8R1F1 749 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Med17Q8VCD5 649 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gramd1aQ8VEF1 722 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 ApofQ91V80 315 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 WwoxQ91WL8 414 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dnajc3Q91YW3 504 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ubox5Q925F4 539 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam227aQ9D3V8 625 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Terb2Q9D494 218 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Actrt2Q9D9L5 377 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ndst3Q9EQH7 873 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 IL36RNQ9QYY1 156 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nccrp1G3X9C2 266 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Socs5O54928 536 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dnase1l3O55070 310 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Kcnn4O89109 425 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 H2-Eb1P04230 264 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 C4bpaP08607 469 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 PrkcdP28867 674 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Meaf6Q2VPQ9 191 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Trafd1Q3UDK1 580 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ino80dQ66JY2 873 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Brsk2Q69Z98 735 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc85bQ6PDY0 202 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Serpinb9dQ8BMT0 377 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Frs2Q8C180 508 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cfap61Q8CEL2 1252 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gprc6aQ8K4Z6 928 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Zfp65Q91W94 390 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mta3Q924K8 591 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rgs10Q9CQE5 181 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Lrrc40Q9CRC8 602 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Lrrc17Q9CXD9 443 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mrps22Q9CXW2 359 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Det1Q9D0A0 550 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ebag9Q9D0V7 213 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nif3l1Q9EQ80 376 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Adam24Q9R160 761 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Capn7Q9R1S8 813 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Coro1bQ9WUM3 484 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rps6ka2Q9WUT3 733 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Auts2A0A087WPF7 1261 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nup62clA2AG10 272 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr1160A2AVT0 319 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tcte1A6H639 498 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr726E9Q8X3 321 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 AF366264G3X9P9 502 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 EsrraO08580 422 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Il4i1O09046 630 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Eef1bO70251 225 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 P01636 108 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr725Q05A45 321 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Pnrc1Q3TWH3 297 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 PhgdhQ61753 533 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Sema4cQ64151 834 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ablim3Q69ZX8 682 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Krt73Q6NXH9 539 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Slc39a10Q6P5F6 833 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rps27lQ6ZWY3 84 aaKnown RBP8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr299Q7TS05 330 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Dync1li1Q8R1Q8 523 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mgat5Q8R4G6 740 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ppil6Q9D6D8 278 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Glipr1l1Q9DAG6 236 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cmtm7Q9ESD6 167 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Gkap1Q9JMB0 366 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Med20Q9R0X0 212 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mapk9Q9WTU6 423 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Clcn5Q9WVD4 746 aa8.67□□□□□ -1.02
Trim39-201ENSMUST00000042717 Igkv12-46A0A140T8P6 115 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r118E9Q1C1 853 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 ChgbP16014 677 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Arhgap45Q3TBD2 1116 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nudt18Q3U2V3 323 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Nxpe4Q52KP5 543 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cyp1b1Q64429 543 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Stx3Q64704 289 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Rftn1Q6A0D4 554 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmem164Q6PHN7 296 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Adam32Q8K410 754 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Olfr96Q8VFE3 313 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 AmotQ8VHG2 1126 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmem98Q91X86 226 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 4933425L06RikQ9D3Z8 585 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Ccdc97Q9DBT3 340 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Insl5Q9WUG6 135 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Cyp2g1Q9WV19 494 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 PapolbQ9WVP6 641 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 RgrQ9Z2B3 291 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Serpinb6cW4VSP4 379 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tnrc18Q80WC3 2878 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Col12a1Q60847 3120 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Grin3aA2AIR5 1135 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Tmem235B1AQL3 211 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Mkrn2osD3Z393 217 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Vmn2r74E9PW21 853 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Slc4a5E9Q3M5 1116 aa8.66□□□□□ -1.02
Trim39-201ENSMUST00000042717 Fam181aJ3QNB7 292 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms