RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 AFAP1L2Q8N4X5 818 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 RMDN1Q96DB5 314 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 UROC1Q96N76 676 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 Q9H521 79 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 LIN28AQ9H9Z2 209 aaKnown RBP16.77■□□□□ 0.27
PHGDH-223ENST00000641597 ZNF225Q9UK10 706 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 ARHGAP10A1A4S6 786 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 TLR5O60602 858 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 PRAMEF11O60813 436 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 RPP40O75818 363 aaKnown RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 RHOBTB1O94844 696 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 CKBP12277 381 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 HOXD9P28356 352 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 CASP2P42575 452 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 HABP4Q5JVS0 413 aaKnown RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 TAS1R1Q7RTX1 841 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 DNAJB14Q8TBM8 379 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 C8orf48Q96LL4 319 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 PPP1R2P1Q96PQ5 205 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 GPR21Q99679 349 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 CMTM6Q9NX76 183 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 BCAP29Q9UHQ4 241 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 ZFC3H1O60293 1989 aaKnown RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 NIPSNAP2O75323 286 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 ECI2O75521 394 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 PSMD8P48556 350 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 STX1BP61266 288 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 C18orf21Q32NC0 220 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 FUT11Q495W5 492 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 MFSD14CQ5VZR4 134 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 SLC15A3Q8IY34 581 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 ARHGAP18Q8N392 663 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 STON2Q8WXE9 905 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 TMEM79Q9BSE2 394 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 AARSD1Q9BTE6 412 aaKnown RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 UPF3AQ9H1J1 476 aaKnown RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 PDFQ9HBH1 243 aa16.76■□□□□ 0.27
PHGDH-223ENST00000641597 ZFP37Q9Y6Q3 630 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-223ENST00000641597 ARHGEF37A1IGU5 675 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 ADAM12O43184 909 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 GJB5O95377 273 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 TNFAIP8O95379 198 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 RPL17P18621 184 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 TACR2P21452 398 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 MAPRE2Q15555 327 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 AP1ARQ63HQ0 302 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 PSAPL1Q6NUJ1 521 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 PRSS55Q6UWB4 352 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 LINGO4Q6UY18 593 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 TMEM74Q96NL1 305 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 RBM38Q9H0Z9 239 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 CAAP1Q9H8G2 361 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 TET1Q8NFU7 2136 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 PLXNA3P51805 1871 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 DRGXA6NNA5 263 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 BAIAP3O94812 1187 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 ACVR1Q04771 509 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 CLCQ05315 142 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 NFE2Q16621 373 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 SAMD4BQ5PRF9 694 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 MRNIPQ6NTE8 343 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 AHI1Q8N157 1196 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 EFHBQ8N7U6 833 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 SIDT2Q8NBJ9 832 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 BRSK1Q8TDC3 778 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 TRIB3Q96RU7 358 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 ZFYVE28Q9HCC9 887 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 SARS2Q9NP81 518 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 GKN1Q9NS71 199 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 DUS2Q9NX74 493 aaKnown RBP16.75■□□□□ 0.27
PHGDH-223ENST00000641597 RNF112Q9ULX5 631 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 SQORQ9Y6N5 450 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 COMMD3-BMI1R4GMX3 469 aa16.75■□□□□ 0.27
PHGDH-223ENST00000641597 MTMR11A4FU01 709 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 ASPDHA6ND91 283 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SLC7A1P30825 629 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 PRKCQQ04759 706 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 GALNT1Q10472 559 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-223ENST00000641597 APOFQ13790 326 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 KANK2Q63ZY3 851 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 TRAF7Q6Q0C0 670 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 EPHX4Q8IUS5 362 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 OR2T11Q8NH01 316 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 WBP2Q969T9 261 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 DGCR14Q96DF8 476 aaKnown RBP16.74■□□□□ 0.27
PHGDH-223ENST00000641597 ZNF597Q96LX8 424 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SOX17Q9H6I2 414 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-223ENST00000641597 ZNF696Q9H7X3 374 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 TANC1Q9C0D5 1861 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 BTN3A1O00481 513 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 PRLP01236 227 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SERPINF2P08697 491 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 SLC6A2P23975 617 aa16.74■□□□□ 0.27
PHGDH-223ENST00000641597 PLIN5Q00G26 463 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms