RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 BPIP17213 487 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 NFATC2Q13469 925 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 SEMA3AQ14563 771 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 PTPRRQ15256 657 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 ZRANB3Q5FWF4 1079 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 CNSTQ6PJW8 725 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 CMC1Q7Z7K0 106 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 CLEC14AQ86T13 490 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 LPGAT1Q92604 370 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 ULK4Q96C45 1275 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 FAM129BQ96TA1 746 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 PRRX2Q99811 253 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 GABRG3Q99928 467 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 HDAC8Q9BY41 377 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 BPIFA1Q9NP55 256 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 PRSS16Q9NQE7 514 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 SLC2A4RGQ9NR83 387 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 TLK1Q9UKI8 766 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 PLLPQ9Y342 182 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 CKAP5Q14008 2032 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 A0A096LPK6 155 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 AGAP14A8MT82 685 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 RNASEH1O60930 286 aaKnown RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 NDUFS3O75489 264 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 ADH1BP00325 375 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 SRFP11831 508 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 CD9P21926 228 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 SLC26A3P40879 764 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 PTGER3P43115 390 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 ETV4P43268 484 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 ABCG1P45844 678 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 KPNA2P52292 529 aaKnown RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 WDR4P57081 412 aaKnown RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 PTSQ03393 145 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 GRSF1Q12849 480 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLN6-219ENST00000637329 RALGDSQ12967 914 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 ITGA9Q13797 1035 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 TERF2Q15554 542 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 TSNAXIP1Q2TAA8 658 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 CCDC153Q494R4 210 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 HSF5Q4G112 596 aaPredicted RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 HHATQ5VTY9 493 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 PSAPL1Q6NUJ1 521 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 TXNDC11Q6PKC3 985 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 LVRNQ6Q4G3 990 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 RGS9BPQ6ZS82 235 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 SLC41A1Q8IVJ1 513 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 GPATCH11Q8N954 259 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 MGARPQ8TDB4 240 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 CKAP2Q8WWK9 683 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 EZH1Q92800 747 aaPredicted RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 TSNARE1Q96NA8 513 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 OMDQ99983 421 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 RSPH9Q9H1X1 276 aaPredicted RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 FBRSL1Q9HCM7 1045 aaKnown RBP15.28■□□□□ 0.04
CLN6-219ENST00000637329 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 SMOXQ9NWM0 555 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 LIMD1Q9UGP4 676 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 MID2Q9UJV3 735 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 SARDHQ9UL12 918 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 PCDHB1Q9Y5F3 818 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
CLN6-219ENST00000637329 PLXNA2O75051 1894 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 GOLGA8CPA6NN73 597 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 IL1BP01584 269 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ESR1P03372 595 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 C2P06681 752 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 APOA4P06727 396 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ELFN1P0C7U0 828 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 SLC35E2BP0CK96 405 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ADRB3P13945 408 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 FDXRP22570 491 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 RPS3P23396 243 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLN6-219ENST00000637329 NTSR1P30989 418 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 SPINT3P49223 89 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 MRPS21P82921 87 aaKnown RBP15.27■□□□□ 0.04
CLN6-219ENST00000637329 ITIH4Q14624 930 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 STARD3Q14849 445 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 LRRC14Q15048 493 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 PDK4Q16654 411 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 FBXO43Q4G163 708 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ZNF789Q5FWF6 425 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 HECTD2Q5U5R9 776 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 SDE2Q6IQ49 451 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 PTCRAQ6ISU1 281 aaPredicted RBP15.27■□□□□ 0.04
CLN6-219ENST00000637329 FAM151BQ6UXP7 276 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 RAPH1Q70E73 1250 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ERN2Q76MJ5 926 aaKnown RBP15.27■□□□□ 0.04
CLN6-219ENST00000637329 TTC7BQ86TV6 843 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 PIANPQ8IYJ0 282 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 RBFAQ8N0V3 343 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ARRDC3Q96B67 414 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 MAGEB18Q96M61 343 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 FAM111AQ96PZ2 611 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 ACOX2Q99424 681 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 AARSD1Q9BTE6 412 aaKnown RBP15.27■□□□□ 0.04
CLN6-219ENST00000637329 SLC13A1Q9BZW2 595 aa15.27■□□□□ 0.04
CLN6-219ENST00000637329 VPS11Q9H270 941 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms