RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 NELFEP18615 380 aaKnown RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 MAPKAPK2P49137 400 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 HERVK_113P63132 956 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 MRPS35P82673 323 aaKnown RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 DEFB115Q30KQ5 88 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 CXorf57Q6NSI4 855 aaKnown RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 AAGABQ6PD74 315 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 PGAM4Q8N0Y7 254 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 TEX37Q96LM6 180 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 ERVK-6Q9BXR3 956 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 MRPL1Q9BYD6 325 aaKnown RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 SMG9Q9H0W8 520 aaKnown RBP18.81■□□□□ 0.6
CLN5-216ENST00000636780 PIF1Q9H611 641 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 SEPT3Q9UH03 358 aa18.81■□□□□ 0.6
CLN5-216ENST00000636780 SLCO1B7G3V0H7 640 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 SMAD6O43541 496 aaKnown RBP18.8■□□□□ 0.6
CLN5-216ENST00000636780 TBL1XO60907 577 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 ECI2O75521 394 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 TMCC1O94876 653 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 ME2P23368 584 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 ARL1P40616 181 aaPredicted RBP18.8■□□□□ 0.6
CLN5-216ENST00000636780 ZNF140P52738 457 aaPredicted RBP18.8■□□□□ 0.6
CLN5-216ENST00000636780 NRF1Q16656 503 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 LARP4Q71RC2 724 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLN5-216ENST00000636780 CAMK1DQ8IU85 385 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 CPNE9Q8IYJ1 553 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 PQLC1Q8N2U9 271 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 BIRC8Q96P09 236 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 ATOH8Q96SQ7 321 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 GPBP1L1Q9HC44 474 aaPredicted RBP18.8■□□□□ 0.6
CLN5-216ENST00000636780 SCOCQ9UIL1 159 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 RNF112Q9ULX5 631 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 H0Y626 953 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 VCLP18206 1134 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 POLD2P49005 469 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 PLIN5Q00G26 463 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 LPGAT1Q92604 370 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 DOCK6Q96HP0 2047 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 ANKRD27Q96NW4 1050 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 C1orf50Q9BV19 199 aa18.8■□□□□ 0.6
CLN5-216ENST00000636780 TDRD1Q9BXT4 1180 aaKnown RBP18.8■□□□□ 0.6
CLN5-216ENST00000636780 EML4Q9HC35 981 aaKnown RBP18.8■□□□□ 0.6
CLN5-216ENST00000636780 KDELR3O43731 214 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 F11P03951 625 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 PAX3P23760 479 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 HK3P52790 923 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 CREB5Q02930 508 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 TPGS1Q6ZTW0 290 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 AMIGO2Q86SJ2 522 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 APCDD1Q8J025 514 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 CLDN19Q8N6F1 224 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 PAF1Q8N7H5 531 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 ZNF296Q8WUU4 475 aaPredicted RBP18.79■□□□□ 0.6
CLN5-216ENST00000636780 TWIST2Q8WVJ9 160 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 VPS33AQ96AX1 596 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 TUBGCP3Q96CW5 907 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 PPP1R2P1Q96PQ5 205 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 HIPK3Q9H422 1215 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 EGFL7Q9UHF1 273 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 ZNF225Q9UK10 706 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 A0A1B0GTW7 788 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 ACOT8O14734 319 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 SMIM24O75264 130 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 KPNA2P52292 529 aaKnown RBP18.79■□□□□ 0.6
CLN5-216ENST00000636780 CDH4P55283 916 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 SMAD3P84022 425 aaKnown RBP18.79■□□□□ 0.6
CLN5-216ENST00000636780 ACVR1Q04771 509 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 LRP8Q14114 963 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 TLR1Q15399 786 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 LRRC73Q5JTD7 316 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 CHSY3Q70JA7 882 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 BOCQ9BWV1 1114 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 MAGEH1Q9H213 219 aa18.79■□□□□ 0.6
CLN5-216ENST00000636780 ANKRD66B4E2M5 251 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 MBL2P11226 248 aaPredicted RBP18.78■□□□□ 0.6
CLN5-216ENST00000636780 CR2P20023 1033 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 FOLH1Q04609 750 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 ZRSR2Q15696 482 aaKnown RBP18.78■□□□□ 0.6
CLN5-216ENST00000636780 C6orf52Q5T4I8 152 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 LCA5Q86VQ0 697 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 TNKS2Q9H2K2 1166 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 ZNF334Q9HCZ1 680 aaPredicted RBP18.78■□□□□ 0.6
CLN5-216ENST00000636780 NLE1Q9NVX2 485 aaPredicted RBP18.78■□□□□ 0.6
CLN5-216ENST00000636780 VPS28Q9UK41 221 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 MRASO14807 208 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 PEX1O43933 1283 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 UGT1A6P19224 532 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 GRIA2P42262 883 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 CASP2P42575 452 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 SLC7A2P52569 658 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 USP41Q3LFD5 358 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 CTSL3PQ5NE16 218 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 TMEM150AQ86TG1 271 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 DCUN1D1Q96GG9 259 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 TRPM5Q9NZQ8 1165 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 SLAMF8Q9P0V8 285 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 FNIP2Q9P278 1114 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 USP22Q9UPT9 525 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 PHF24Q9UPV7 400 aa18.78■□□□□ 0.6
CLN5-216ENST00000636780 DTNAQ9Y4J8 743 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms