RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 DCAF12Q5T6F0 453 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 TMEM71Q6P5X7 295 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 CACNA2D3Q8IZS8 1091 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 SLC37A2Q8TED4 501 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 SCARF2Q96GP6 870 aaPredicted RBP18.86■□□□□ 0.61
SMN2-215ENST00000628696 BTBD6Q96KE9 485 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 GBP4Q96PP9 640 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 AGAP2Q99490 1192 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 DDA1Q9BW61 102 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 ASPSCR1Q9BZE9 553 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 NAT10Q9H0A0 1025 aaKnown RBP18.86■□□□□ 0.61
SMN2-215ENST00000628696 ZNHIT2Q9UHR6 403 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 PPIL1Q9Y3C6 166 aa18.86■□□□□ 0.61
SMN2-215ENST00000628696 A8MU76 341 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 SSR1P43307 286 aaKnown RBP18.85■□□□□ 0.61
SMN2-215ENST00000628696 GPLD1P80108 840 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 TYRO3Q06418 890 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 PIGHQ14442 188 aaPredicted RBP18.85■□□□□ 0.61
SMN2-215ENST00000628696 ANO6Q4KMQ2 910 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 ANKS6Q68DC2 871 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 BORAQ6PGQ7 559 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 OR10G6Q8NH81 332 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 RIOK2Q9BVS4 552 aaKnown RBP18.85■□□□□ 0.61
SMN2-215ENST00000628696 ISCUQ9H1K1 167 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 PRKAB1Q9Y478 270 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 TTLL3Q9Y4R7 772 aa18.85■□□□□ 0.61
SMN2-215ENST00000628696 A0A0J9YYE9 177 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 RAD1O60671 282 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 MAP3K6O95382 1288 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 TRBC1P01850 177 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 PYGLP06737 847 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 MMRN1Q13201 1228 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 CCDC122Q5T0U0 273 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 CCDC183Q5T5S1 534 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 PTRH1Q86Y79 214 aaKnown RBP18.84■□□□□ 0.61
SMN2-215ENST00000628696 TEX26Q8N6G2 289 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 EXD1Q8NHP7 514 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 TEKT4Q8WW24 435 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 POLR1EQ9GZS1 481 aaKnown RBP18.84■□□□□ 0.61
SMN2-215ENST00000628696 CHKBQ9Y259 395 aa18.84■□□□□ 0.61
SMN2-215ENST00000628696 B4E171 279 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 GOLGA6L22H0YM25 854 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 DUX1O43812 170 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 FZD6O60353 706 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 EML2O95834 649 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 ATP1A1P05023 1023 aaKnown RBP18.83■□□□□ 0.6
SMN2-215ENST00000628696 ZNF30P17039 623 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 TSPAN7P41732 249 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 FASLGP48023 281 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 STC1P52823 247 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 DSC2Q02487 901 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 NFATC2Q13469 925 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 LRP8Q14114 963 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 TDRD12Q587J7 1177 aaKnown RBP18.83■□□□□ 0.6
SMN2-215ENST00000628696 ZNF765Q7L2R6 523 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 CHST15Q7LFX5 561 aaPredicted RBP18.83■□□□□ 0.6
SMN2-215ENST00000628696 NLRP8Q86W28 1048 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 NCSTNQ92542 709 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 COX14Q96I36 57 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 NAP1L5Q96NT1 182 aaPredicted RBP18.83■□□□□ 0.6
SMN2-215ENST00000628696 CTRCQ99895 268 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 ADNPQ9H2P0 1102 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.6
SMN2-215ENST00000628696 IP6K2Q9UHH9 426 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 ANAPC7Q9UJX3 599 aa18.83■□□□□ 0.6
SMN2-215ENST00000628696 SMTNL1A8MU46 457 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 MFSD11O43934 449 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 CLDN7O95471 211 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 CD48P09326 243 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 MAPK9P45984 424 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 CCR10P46092 362 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 POLE2P56282 527 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 RAB15P59190 212 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 SLC25A11Q02978 314 aaKnown RBP18.82■□□□□ 0.6
SMN2-215ENST00000628696 HHEXQ03014 270 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 KCNAB2Q13303 367 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 LRRC49Q8IUZ0 686 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 SFRP1Q8N474 314 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 THAP2Q9H0W7 228 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 NAV2Q8IVL1 2488 aa18.82■□□□□ 0.6
SMN2-215ENST00000628696 ZNF891A8MT65 544 aaPredicted RBP18.81■□□□□ 0.6
SMN2-215ENST00000628696 SNX2O60749 519 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 CES1P23141 567 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 IL4RP24394 825 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 GJC1P36383 396 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 GARSP41250 739 aaKnown RBP18.81■□□□□ 0.6
SMN2-215ENST00000628696 ZNF165P49910 485 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 TLE1Q04724 770 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 IHHQ14623 411 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.81■□□□□ 0.6
SMN2-215ENST00000628696 NIPA2Q8N8Q9 360 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 LPCAT1Q8NF37 534 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 RTP4Q96DX8 246 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 TEFMQ96QE5 360 aaKnown RBP18.81■□□□□ 0.6
SMN2-215ENST00000628696 NUP85Q9BW27 656 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 STN1Q9H668 368 aaKnown RBP18.81■□□□□ 0.6
SMN2-215ENST00000628696 GPN2Q9H9Y4 310 aaPredicted RBP18.81■□□□□ 0.6
SMN2-215ENST00000628696 TBC1D29Q9UFV1 150 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 KLHL3Q9UH77 587 aa18.81■□□□□ 0.6
SMN2-215ENST00000628696 PILRAQ9UKJ1 303 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms