RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 MLNP12872 115 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF140P52738 457 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 NFATC4Q14934 902 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 SKIDA1Q1XH10 827 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 HLA-BQ31612 363 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 PDPK2PQ6A1A2 396 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 C8orf74Q6P047 294 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 MACC1Q6ZN28 852 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 NLRP9Q7RTR0 991 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 HOOK3Q86VS8 718 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 HEATR4Q86WZ0 1026 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 SPATS2Q86XZ4 545 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 SLC22A18ASQ8N1D0 253 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 PELI3Q8N2H9 469 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 TRAM1L1Q8N609 369 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 NAT8LQ8N9F0 302 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 STYXQ8WUJ0 223 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 RANBP9Q96S59 729 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 ERP44Q9BS26 406 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 TEX101Q9BY14 249 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 RAB17Q9H0T7 212 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 GAREM1Q9H706 876 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 ERVMER34-1Q9H9K5 563 aa19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 UTP11Q9Y3A2 253 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 TDRD6O60522 2096 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-216ENST00000626660 GLYATL1P3A0A0U1RQE8 302 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 MYCLP1P12525 358 aaPredicted RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 IVDP26440 423 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 ARRB1P49407 418 aaPredicted RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 MRPS25P82663 173 aaKnown RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 PTPRCAPQ14761 206 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 MORF4L2Q15014 288 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF423Q2M1K9 1284 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 CCDC38Q502W7 563 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 PCID2Q5JVF3 399 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 FAM151BQ6UXP7 276 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF534Q76KX8 674 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 PARGQ86W56 976 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 MINDY1Q8N5J2 469 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 BBOF1Q8ND07 529 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 OR13C4Q8NGS5 318 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 FUBP1Q96AE4 644 aaKnown RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 HIC2Q96JB3 615 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 DNAJC1Q96KC8 554 aaKnown RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 WDR92Q96MX6 357 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 AGAP2Q99490 1192 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 ELF4Q99607 663 aaPredicted RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 FRMD8Q9BZ67 464 aaPredicted RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 IL26Q9NPH9 171 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 TMEM9BQ9NQ34 198 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 APPL1Q9UKG1 709 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 TCAF1Q9Y4C2 921 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF106Q9H2Y7 1883 aaKnown RBP19■□□□□ 0.63
SQSTM1-216ENST00000626660 DMDP11532 3685 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 ZNF292O60281 2723 aa19■□□□□ 0.63
SQSTM1-216ENST00000626660 MROH6A6NGR9 719 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 INPP4BO15327 924 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 YKT6O15498 198 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 SEC31AO94979 1220 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 SOD1P00441 154 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 MGAT1P26572 445 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 TMPRSS15P98073 1019 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 CDK3Q00526 305 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 CALCOCO2Q13137 446 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 ITGA9Q13797 1035 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 FZD2Q14332 565 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 ENPP7Q6UWV6 458 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 KIAA2013Q8IYS2 634 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 MMGT1Q8N4V1 131 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 DTX3LQ8TDB6 740 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 NLE1Q9NVX2 485 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 DNAJC28Q9NX36 388 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 SAMD15Q9P1V8 674 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 FKBPLQ9UIM3 349 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 ANAPC5Q9UJX4 755 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 RIMKLBQ9ULI2 386 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 SNX24Q9Y343 169 aa18.99■□□□□ 0.63
SQSTM1-216ENST00000626660 CCDC78A2IDD5 438 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 FADS2P1A8MWK0 482 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 CHRNA6Q15825 494 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 TPRG1LQ5T0D9 272 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 TSTD2Q5T7W7 516 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 ARMC3Q5W041 872 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 CASC4Q6P4E1 433 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 CAND1Q86VP6 1230 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 PHYKPLQ8IUZ5 450 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 OR2I1PQ8NGU4 316 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 PTCD2Q8WV60 388 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 SERPINB12Q96P63 405 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 LGR4Q9BXB1 951 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 DPH5Q9H2P9 285 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 KLQ9UEF7 1012 aa18.98■□□□□ 0.63
SQSTM1-216ENST00000626660 SDR42E2A6NKP2 422 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 H3BM21 787 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 PRAMEF1O95521 474 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 ITGALP20701 1170 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 RPL21P46778 160 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 CCT8P50990 548 aa18.97■□□□□ 0.63
SQSTM1-216ENST00000626660 ITGA8P53708 1063 aa18.97■□□□□ 0.63
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