RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TRAPPC12Q8WVT3 735 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 LPGAT1Q92604 370 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GTF2H4Q92759 462 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 HDAC2Q92769 488 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 SNAPC3Q92966 411 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 DACT3Q96B18 629 aaPredicted RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 NXNL1Q96CM4 212 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 MMP19Q99542 508 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 MRPL4Q9BYD3 311 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 C2orf40Q9H1Z8 148 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 PLSCR3Q9NRY6 295 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 AGPAT4Q9NRZ5 378 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GPATCH2LQ9NWQ4 482 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 GLTPQ9NZD2 209 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 DIMT1Q9UNQ2 313 aaKnown RBP7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 VWA7Q9Y334 891 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 COMMD10Q9Y6G5 202 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 KCNE2Q9Y6J6 123 aa7.49□□□□□ -1.21
TRIM49B-202ENST00000622138 UTRNP46939 3433 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 RNF103-CHMP3A0A140T963 221 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 TYW5A2RUC4 315 aaKnown RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 HMX3A6NHT5 357 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 AQP12BA6NM10 295 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 TBX1O43435 398 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 ATG13O75143 517 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 FGF18O76093 207 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 KRT19P08727 400 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 BTF3P20290 206 aaKnown RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 FASP25445 335 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 ERP29P30040 261 aaKnown RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 MAGEA11P43364 429 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 ABCG1P45844 678 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 POLR2GP62487 172 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF45Q02386 682 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 LAPTM5Q13571 262 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 STXBP2Q15833 593 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 HADHQ16836 314 aaKnown RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 DARS2Q6PI48 645 aaKnown RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 CATSPERGQ6ZRH7 1159 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 SPATC1Q76KD6 591 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 TMEM151BQ8IW70 566 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 AQP12AQ8IXF9 295 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 UNC5BQ8IZJ1 945 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 OR7D4Q8NG98 312 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 LRRC39Q96DD0 335 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 MCRS1Q96EZ8 462 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 CENPNQ96H22 339 aaPredicted RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 C12orf42Q96LP6 360 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 TRAF4Q9BUZ4 470 aaPredicted RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 BCO2Q9BYV7 579 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 POPDC2Q9HBU9 364 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 ZBTB26Q9HCK0 441 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 CCM2LQ9NUG4 571 aaPredicted RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC39A1Q9NY26 324 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 ADA2Q9NZK5 511 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 SLCO3A1Q9UIG8 710 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 TRMT6Q9UJA5 497 aaKnown RBP7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 EMCNQ9ULC0 261 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 USP18Q9UMW8 372 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 NAALAD2Q9Y3Q0 740 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 A3GALT2U3KPV4 340 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 WDR90Q96KV7 1748 aa7.48□□□□□ -1.21
TRIM49B-202ENST00000622138 SSC5DA1L4H1 1573 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 LINC00862A6NCI5 91 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF487B1APH4 448 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 H0Y858 1186 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 M0QYV0 167 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MEN1O00255 615 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 GRAP2O75791 330 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SNX4O95219 450 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 ARIH2O95376 493 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PDGFAP04085 211 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CSH1P0DML2 217 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CSH2P0DML3 217 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PSKH1P11801 424 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 HMGB2P26583 209 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 UQCRC1P31930 480 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 RPS5P46782 204 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 YAP1P46937 504 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 POLD2P49005 469 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MAPKAPK2P49137 400 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 STAT5BP51692 787 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CDH6P55285 790 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 TNFAIP1Q13829 316 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 INPP5AQ14642 412 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 Q5BKY6 102 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 SAMD4BQ5PRF9 694 aaKnown RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CATSPEREQ5SY80 951 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 N4BP2L1Q5TBK1 243 aaPredicted RBP7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 PMF1Q6P1K2 205 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 DBX2Q6ZNG2 339 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CATSPER4Q7RTX7 472 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 MICALL2Q8IY33 904 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 METTL4Q8N3J2 472 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
TRIM49B-202ENST00000622138 C1orf127Q8N9H9 656 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms