RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 SOX13Q9UN79 622 aa10.88□□□□□ -0.67
POLR2J3-221ENST00000621093 HS3ST3A1Q9Y663 406 aa10.88□□□□□ -0.67
POLR2J3-221ENST00000621093 ZFC3H1O60293 1989 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-221ENST00000621093 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 GLYATL1P3A0A0U1RQE8 302 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 A0A1B0GTW7 788 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 CCDC162PA2VCL2 907 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 RGSL1A5PLK6 1076 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 A6NNZ2 444 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 AP3B1O00203 1094 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 PPFIA2O75334 1257 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 THEGLP0DJG4 465 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 ECHS1P30084 290 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 MC4RP32245 332 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 NUDT1P36639 197 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 MPLP40238 635 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 ELK3P41970 407 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 CDKN1CP49918 316 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 ARL4CP56559 192 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 DCDC1P59894 354 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 PFN3P60673 137 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 PDIA2Q13087 525 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 HIF1AQ16665 826 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 ATP13A5Q4VNC0 1218 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 KCTD16Q68DU8 428 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 TCEAL6Q6IPX3 200 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 KYAT3Q6YP21 454 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 HEATR4Q86WZ0 1026 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 SPATS2Q86XZ4 545 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 DCLK2Q8N568 766 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 TCEAL3Q969E4 200 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 HDAC10Q969S8 669 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 ZNF669Q96BR6 464 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 KLHDC7BQ96G42 594 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 LOXL4Q96JB6 756 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 PLEKHG4BQ96PX9 1271 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 KIFC1Q9BW19 673 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 PLAC1Q9HBJ0 212 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 GDF3Q9NR23 364 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 FAM114A2Q9NRY5 505 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 TREX1Q9NSU2 369 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 IL1RAPL1Q9NZN1 696 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 NFKBIL1Q9UBC1 381 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 CHMP2BQ9UQN3 213 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 MAD1L1Q9Y6D9 718 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 OAS3Q9Y6K5 1087 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 CACNA1HO95180 2353 aa10.87□□□□□ -0.67
POLR2J3-221ENST00000621093 PIKFYVEQ9Y2I7 2098 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SMAPO00193 183 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SCAMP1O15126 338 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SRP72O76094 671 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 GOT2P00505 430 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 LMNAP02545 664 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 CFIP05156 583 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 GNSP15586 552 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TSHRP16473 764 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PSMA3P25788 255 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TRIM23P36406 574 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 CDK3Q00526 305 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PDE1BQ01064 536 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 ACVR1Q04771 509 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SPEM2Q0P670 501 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PDE1CQ14123 709 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 HLTFQ14527 1009 aaKnown RBP eCLIP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 NAA30Q147X3 362 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 DUOXA1Q1HG43 343 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 ANKRD20A4Q4UJ75 823 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 KHDC1Q4VXA5 237 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TRIM61Q5EBN2 209 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 DNAJC21Q5F1R6 531 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PRAMEF14Q5SWL7 426 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 NLRP8Q86W28 1048 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 CCDC25Q86WR0 208 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 RAVER1Q8IY67 606 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 GSPT2Q8IYD1 628 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 UNC5BQ8IZJ1 945 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TRAM1L1Q8N609 369 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 MFSD2AQ8NA29 543 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 ZNF398Q8TD17 642 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PTCD2Q8WV60 388 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 CCDC97Q96F63 343 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 STAMBPL1Q96FJ0 436 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 CFAP36Q96G28 342 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 EBNA1BP2Q99848 306 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TEX101Q9BY14 249 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 ANKZF1Q9H8Y5 726 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 MRM3Q9HC36 420 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SAYSD1Q9NPB0 183 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 GPR27Q9NS67 375 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 RAD18Q9NS91 495 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SAMD15Q9P1V8 674 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 RIMKLBQ9ULI2 386 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 PNMA8BQ9ULN7 279 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TMEM98Q9Y2Y6 226 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 SNX11Q9Y5W9 270 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 TEX264Q9Y6I9 313 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 WDFY4Q6ZS81 3184 aa10.86□□□□□ -0.67
POLR2J3-221ENST00000621093 ZCWPW2A0A1B0GU75 182 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms