RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 LIPEQ05469 1076 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 PDCD4Q53EL6 469 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 ZC3H7AQ8IWR0 971 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 DNAJB14Q8TBM8 379 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 PNPT1Q8TCS8 783 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 KCTD14Q9BQ13 255 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 SLC25A51Q9H1U9 297 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 CSNK1G1Q9HCP0 422 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 INIPQ9NRY2 104 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 RGS18Q9NS28 235 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 BTRCQ9Y297 605 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 GPR45Q9Y5Y3 372 aa19.52■□□□□ 0.72
PDLIM3-212ENST00000620787 DYTNA2CJ06 578 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 IQCA1LA6NCM1 817 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 H0Y858 1186 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 K7EPI3 171 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 UBXN8O00124 270 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 SERPINB7O75635 380 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 LDLRP01130 860 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 MT-ND1P03886 318 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 FDXRP22570 491 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 MAPK10P53779 464 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 TIAL1Q01085 375 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 NFYCQ13952 458 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 OR4D1Q15615 310 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 PYCR3Q53H96 274 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 C16orf87Q6PH81 154 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 ZNF773Q6PK81 442 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 MOB2Q70IA6 237 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 OR6P1Q8NGX9 317 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 TLR9Q9NR96 1032 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 OSER1Q9NX31 292 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 DOLKQ9UPQ8 538 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 MBLAC1A4D2B0 266 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 SOBPA7XYQ1 873 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 H3BMM5 538 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 IRAK2O43187 625 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 NOL3O60936 208 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 SLC4A1P02730 911 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 UMPSP11172 480 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 MTHFD2P13995 350 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 IDO1P14902 403 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 CCNA2P20248 432 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 ZFP36L2P47974 494 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 TMBIM6P55061 237 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 DIO3P55073 304 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 TRAF2Q12933 501 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 RPS6KA2Q15349 733 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 DUSP28Q4G0W2 176 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 TMEM86AQ8N2M4 240 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 RYBPQ8N488 228 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 CHPT1Q8WUD6 406 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 VPS33AQ96AX1 596 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 TSPYL2Q9H2G4 693 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 ZFYVE28Q9HCC9 887 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 PALMDQ9NP74 551 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 PFDN4Q9NQP4 134 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 CDH9Q9ULB4 789 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 PAIP2BQ9ULR5 123 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 CRYL1Q9Y2S2 319 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 PCNTO95613 3336 aa19.51■□□□□ 0.71
PDLIM3-212ENST00000620787 A0A1B0GTL3 188 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 A0A1W2PP18 115 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 MROH6A6NGR9 719 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 J3QRK9 145 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 JUNBP17275 347 aaPredicted RBP19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 SOX11P35716 441 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 BCAP31P51572 246 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 FSCN1Q16658 493 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 ZNF549Q6P9A3 640 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 SLC16A10Q8TF71 515 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 MYLPFQ96A32 169 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 FBXL8Q96CD0 374 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 IMP4Q96G21 291 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 TEX37Q96LM6 180 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 FANCEQ9HB96 536 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 GNPTGQ9UJJ9 305 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 USP22Q9UPT9 525 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 CORINQ9Y5Q5 1042 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 ANKRD36A6QL64 1941 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 H0YAE9 185 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 TNPO2O14787 897 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 B4GAT1O43505 415 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 SEC14L2O76054 403 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 PEX11BO96011 259 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 ELK4P28324 431 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 HTR7P34969 479 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 KCNC4Q03721 635 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 IHHQ14623 411 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 PFKFB4Q16877 469 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 PAGE3Q5JUK9 113 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 RAB44Q7Z6P3 723 aaPredicted RBP19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 ZBTB46Q86UZ6 589 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 KIAA2013Q8IYS2 634 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 SLC15A4Q8N697 577 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 TSPEARQ8WU66 669 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 FCRL2Q96LA5 508 aaPredicted RBP19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 TMEM165Q9HC07 324 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 SELENONQ9NZV5 590 aa19.5■□□□□ 0.71
PDLIM3-212ENST00000620787 RGS17Q9UGC6 210 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms