RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CNOT6Q9ULM6 557 aaKnown RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 PCDHGA8Q9Y5G5 932 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 PCYT1BQ9Y5K3 369 aaPredicted RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 PTPRQQ9UMZ3 2332 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 AGRPO00253 132 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 NUDT21O43809 227 aaKnown RBP17.06■□□□□ 0.32
HMGN3-203ENST00000620514 TNFSF15O95150 251 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 LCA5LO95447 670 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 ECEL1O95672 775 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 PIRTP0C851 137 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 PNLIPP16233 465 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 MARCKSL1P49006 195 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 SPINT3P49223 89 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 HADHBP55084 474 aaKnown RBP17.06■□□□□ 0.32
HMGN3-203ENST00000620514 INHBCP55103 352 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 ADCY2Q08462 1091 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 PCSK7Q16549 785 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 SPOCD1Q6ZMY3 1216 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 LYSMD3Q7Z3D4 306 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 TMPRSS9Q7Z410 1059 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 NT5DC3Q86UY8 548 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 ARL14Q8N4G2 192 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 EXD1Q8NHP7 514 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 SPATA22Q8NHS9 363 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 LIN37Q96GY3 246 aaPredicted RBP17.06■□□□□ 0.32
HMGN3-203ENST00000620514 OR2M4Q96R27 311 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 PCDHA13Q9Y5I0 950 aa17.06■□□□□ 0.32
HMGN3-203ENST00000620514 OAS3Q9Y6K5 1087 aaKnown RBP17.06■□□□□ 0.32
HMGN3-203ENST00000620514 FADS2P1A8MWK0 482 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 CDRT15L2A8MXV6 281 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 B4GAT1O43505 415 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 PSTPIP1O43586 416 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 CST8O60676 142 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 ASMTLO95671 621 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 MT-CYBP00156 380 aaPredicted RBP17.05■□□□□ 0.32
HMGN3-203ENST00000620514 ATP1A1P05023 1023 aaKnown RBP17.05■□□□□ 0.32
HMGN3-203ENST00000620514 PYGLP06737 847 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 HGFP14210 728 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 PTPN3P26045 913 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 ACTR1BP42025 376 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 OR1D5P58170 312 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 ACTR1AP61163 376 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 B4GALNT1Q00973 533 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 PRKD1Q15139 912 aaPredicted RBP17.05■□□□□ 0.32
HMGN3-203ENST00000620514 PYCR3Q53H96 274 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 HENMT1Q5T8I9 393 aaKnown RBP17.05■□□□□ 0.32
HMGN3-203ENST00000620514 NAGSQ8N159 534 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 FBXO39Q8N4B4 442 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 KCNE4Q8WWG9 221 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 TADA1Q96BN2 335 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 ADGRE3Q9BY15 652 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 CDH19Q9H159 772 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 RBSNQ9H1K0 784 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 SLC25A51Q9H1U9 297 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 FAM83DQ9H4H8 585 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 GLOD4Q9HC38 313 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 SHOC2Q9UQ13 582 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 PRKAB1Q9Y478 270 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 IGSF10Q6WRI0 2623 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 UNC13CQ8NB66 2214 aa17.05■□□□□ 0.32
HMGN3-203ENST00000620514 DNAJC6O75061 913 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 CCKBRP32239 447 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 ZNF75DP51815 510 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 CDK18Q07002 472 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 TFDP2Q14188 446 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 TEX44Q53QW1 395 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 RAB11FIP2Q7L804 512 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 ZNF438Q7Z4V0 828 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 GALNT13Q8IUC8 556 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 RAVER1Q8IY67 606 aaKnown RBP17.04■□□□□ 0.32
HMGN3-203ENST00000620514 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 CCHCR1Q8TD31 782 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 TMEM74Q96NL1 305 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 FCRL3Q96P31 734 aaPredicted RBP17.04■□□□□ 0.32
HMGN3-203ENST00000620514 UBP1Q9NZI7 540 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 PKD2L2Q9NZM6 624 aa17.04■□□□□ 0.32
HMGN3-203ENST00000620514 TRBV23OR9-2A0A075B6M9 112 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 hCG_1818297A0A087WSY0 165 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 SOWAHDA6NJG2 315 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 RHPN2P1A8MT19 583 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 PLD2O14939 933 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 KLK10O43240 276 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 SLC4A1P02730 911 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ALDH4A1P30038 563 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 CD68P34810 354 aaPredicted RBP17.03■□□□□ 0.32
HMGN3-203ENST00000620514 UGT1A5P35504 534 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 CXADRP78310 365 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ZFP36L1Q07352 338 aaKnown RBP17.03■□□□□ 0.32
HMGN3-203ENST00000620514 WASHC5Q12768 1159 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 SPA17Q15506 151 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 AMZ1Q400G9 498 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 ALS2CLQ60I27 953 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 CLEC14AQ86T13 490 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 KATNAL2Q8IYT4 538 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 TFB1MQ8WVM0 346 aaKnown RBP17.03■□□□□ 0.32
HMGN3-203ENST00000620514 KRT35Q92764 455 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 HAUS1Q96CS2 278 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 TEKT5Q96M29 485 aa17.03■□□□□ 0.32
HMGN3-203ENST00000620514 STRADBQ9C0K7 418 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms