RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 VPS35Q96QK1 796 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 TMEM121Q9BTD3 319 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 DUSP23Q9BVJ7 150 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 RIOK2Q9BVS4 552 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 SLC13A1Q9BZW2 595 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 PHPT1Q9NRX4 125 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 RAD18Q9NS91 495 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 TRNAU1APQ9NX07 287 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 PKD2L2Q9NZM6 624 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 VPS18Q9P253 973 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 SPASTQ9UBP0 616 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 KLQ9UEF7 1012 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 FTSJ1Q9UET6 329 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 APOBEC3BQ9UH17 382 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 CD84Q9UIB8 345 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 APOBEC2Q9Y235 224 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 ST14Q9Y5Y6 855 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 LAMA5O15230 3695 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ZNF106Q9H2Y7 1883 aaKnown RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 PRSS38A1L453 326 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 EME2A4GXA9 379 aaPredicted RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 PRR19A6NJB7 356 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 USP27XA6NNY8 438 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 DNAJC6O75061 913 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 PPFIA2O75334 1257 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 AP2A1O95782 977 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 TNFP01375 233 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 FGGP02679 453 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 GP1BAP07359 652 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 CELA2BP08218 269 aaPredicted RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 PIRTP0C851 137 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 GPR1P46091 355 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 SEMA5AQ13591 1074 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ELOCQ15369 112 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 CYP1B1Q16678 543 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 FAXCQ5TGI0 409 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ZDHHC20Q5W0Z9 365 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 DENND2CQ68D51 928 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 RAET1GQ6H3X3 334 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 CCDC70Q6NSX1 233 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 KDELC2Q7Z4H8 507 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 NRROSQ86YC3 692 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 GLIS1Q8NBF1 620 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 BRSK1Q8TDC3 778 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ACTRT1Q8TDG2 376 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 LMX1AQ8TE12 382 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 MAIP1Q8WWC4 291 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 C1orf54Q8WWF1 131 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 PBKQ96KB5 322 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 APOLD1Q96LR9 279 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ZSCAN5AQ9BUG6 496 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 IL26Q9NPH9 171 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 MRPL40Q9NQ50 206 aaKnown RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEK3-209ENST00000618856 NCKIPSDQ9NZQ3 722 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 TMPRSS11EQ9UL52 423 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 SHOC2Q9UQ13 582 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 NEUROG3Q9Y4Z2 214 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 PCYT1BQ9Y5K3 369 aaPredicted RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 OAS3Q9Y6K5 1087 aaKnown RBP8.2□□□□□ -1.1
NEK3-209ENST00000618856 ZFHX4Q86UP3 3567 aa8.2□□□□□ -1.1
NEK3-209ENST00000618856 ZZEF1O43149 2961 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 COL27A1Q8IZC6 1860 aaPredicted RBP8.19□□□□□ -1.1
NEK3-209ENST00000618856 GOLGA8CPA6NN73 597 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 ERI2A8K979 691 aaKnown RBP8.19□□□□□ -1.1
NEK3-209ENST00000618856 GPR89AB7ZAQ6 455 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 CHUKO15111 745 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 PSMD3O43242 534 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 LDB2O43679 373 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 TOP3BO95985 862 aaKnown RBP8.19□□□□□ -1.1
NEK3-209ENST00000618856 CAPNS1P04632 268 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 ATP1A1P05023 1023 aaKnown RBP8.19□□□□□ -1.1
NEK3-209ENST00000618856 GPR89BP0CG08 455 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 ALPPL2P10696 532 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 CXCR5P32302 372 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 POLD2P49005 469 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 CCDC173Q0VFZ6 552 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 DNAJC3Q13217 504 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 OLIG2Q13516 323 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 C1orf61Q13536 156 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 PRPSAP1Q14558 356 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 TAF1AQ15573 450 aaPredicted RBP8.19□□□□□ -1.1
NEK3-209ENST00000618856 PYCR3Q53H96 274 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 CDCP2Q5VXM1 449 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 ARHGEF18Q6ZSZ5 1173 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 HID1Q8IV36 788 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 SLC35F3Q8IY50 421 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 SLC35F6Q8N357 371 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 ARL10Q8N8L6 244 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 GPR156Q8NFN8 814 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 TBL1YQ9BQ87 522 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 FICDQ9BVA6 458 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 FSD1LQ9BXM9 530 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms