RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 COG8Q96MW5 612 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 NDST4Q9H3R1 872 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 ERVMER34-1Q9H9K5 563 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 BPIFA1Q9NP55 256 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 GPR108Q9NPR9 543 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 HINT3Q9NQE9 182 aaKnown RBP2.71□□□□□ -1.98
TARDBP-220ENST00000618606 C2orf42Q9NWW7 574 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 OGFRQ9NZT2 677 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 CTNNAL1Q9UBT7 734 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 POLG2Q9UHN1 485 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 FAM96BQ9Y3D0 163 aa2.71□□□□□ -1.98
TARDBP-220ENST00000618606 PTPRCP08575 1304 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 A0A087X002 238 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 ZCWPW2A0A1B0GU75 182 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 PSMD14O00487 310 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 SH3BP5O60239 455 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 PIP5K1CO60331 668 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 TSPAN3O60637 253 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 NBNO60934 754 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 ZNF821O75541 412 aaPredicted RBP2.7□□□□□ -1.98
TARDBP-220ENST00000618606 TCEA3O75764 348 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 TFP02787 698 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 CD48P09326 243 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 FAM106CPP0CH98 169 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 SP100P23497 879 aaPredicted RBP2.7□□□□□ -1.98
TARDBP-220ENST00000618606 FASLGP48023 281 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 GRIK2Q13002 908 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 TMEM35AQ53FP2 167 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 TXNDC8Q6A555 127 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 DUS1LQ6P1R4 473 aaKnown RBP2.7□□□□□ -1.98
TARDBP-220ENST00000618606 STXBP4Q6ZWJ1 553 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 SLC46A3Q7Z3Q1 461 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 TNIP2Q8NFZ5 429 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 OR5R1Q8NH85 324 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 HUS1BQ8NHY5 278 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 FCAMRQ8WWV6 532 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 SLC41A2Q96JW4 573 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 QRFPRQ96P65 431 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 BBS4Q96RK4 519 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 FAM110AQ9BQ89 295 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 REEP2Q9BRK0 252 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 CDK19Q9BWU1 502 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 UBXN6Q9BZV1 441 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 UPF2Q9HAU5 1272 aaKnown RBP2.7□□□□□ -1.98
TARDBP-220ENST00000618606 SLC52A3Q9NQ40 469 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 ZDHHC18Q9NUE0 388 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 PAK5Q9P286 719 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 C2CD2Q9Y426 696 aa2.7□□□□□ -1.98
TARDBP-220ENST00000618606 AGRNO00468 2067 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 CTSVO60911 334 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 FTCDO95954 541 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 URODP06132 367 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 GALTP07902 379 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ZNF23P17027 643 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 CHKAP35790 457 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 GPD2P43304 727 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ARCN1P48444 511 aaKnown RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 CLK1P49759 484 aaKnown RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 EFNB1P98172 346 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 RALBP1Q15311 655 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ZRSR2Q15696 482 aaKnown RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 TECRLQ5HYJ1 363 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ANO1Q5XXA6 986 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 SPINK14Q6IE38 97 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 OR7E24Q6IFN5 339 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 TTI2Q6NXR4 508 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 PCDH20Q8N6Y1 951 aaKnown RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ENAHQ8N8S7 591 aaPredicted RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 OR52I2Q8NH67 350 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ZNF473Q8WTR7 871 aaKnown RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 RHBDF1Q96CC6 855 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ELP4Q96EB1 424 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 LINGO1Q96FE5 620 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 MAP3K20Q9NYL2 800 aaKnown RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 HSPB7Q9UBY9 170 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 PNMA2Q9UL42 364 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 DISP3Q9P2K9 1392 aa2.69□□□□□ -1.98
TARDBP-220ENST00000618606 COL5A2P05997 1499 aaPredicted RBP2.69□□□□□ -1.98
TARDBP-220ENST00000618606 ARHGEF9O43307 516 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 CAVIN2O95810 425 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 POLR2CP19387 275 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 POU1F1P28069 291 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 HALP42357 657 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 CSRP3P50461 194 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 CSNK2A1P68400 391 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 IRX6P78412 446 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 ITGA9Q13797 1035 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 RNPS1Q15287 305 aaKnown RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 ANKRD45Q5TZF3 282 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 FRG2Q64ET8 278 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 HIST2H2BDQ6DRA6 164 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 ZNF280DQ6N043 979 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 FAAP20Q6NZ36 180 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 TMEM81Q6P7N7 255 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 RBMS3Q6XE24 437 aaKnown RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 ZNF704Q6ZNC4 412 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 SUGP1Q8IWZ8 645 aaKnown RBP2.68□□□□□ -1.98
TARDBP-220ENST00000618606 ZNF440Q8IYI8 595 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 BEST3Q8N1M1 668 aa2.68□□□□□ -1.98
TARDBP-220ENST00000618606 MYCT1Q8N699 235 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms